AMCG00013267 (exoc7)


Basic Information

Item Value
gene id AMCG00013267
gene name exoc7
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26588755 ~ 26608863 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013267
CTTGTTTCGTGTTGACATATACAGGAACAAGACTAATAAGCCCTGTTAGCAGGAAGGGCGCAGATCATTTTGTTGGACTAGAgctgaaaacattaataaacgGACAGTAAAGCACTTTCCGATCACTGTGCAGCATGATCCCGACGGAGGATGCATCCGCCAGGAAAAGGGAAATAGAGGAGAAACTGAAACAGGAACAGGATACATTATCATTTATCCGTGATAACTTGGAGAAGAGTGATCAGTTGACCAAAGGCATGGTGTCCATCTTGTCCTCGTTCGAGAGCCGCCTCATGCAGCTGGAGAACTCCATCATCCCTGTGCACAAGCAGACTGAGAATCTGCAGCGCCTGCAGGACAACGTGGACAAGaccctctcctgcctggaccaTGTGATCAGCTACTACCACGTAGCAAAAGACACGGACAAGATCATAAAGGAAGGACCTGCAGGCAGACTCGAGGAGTATCTGGCTTGTATCGCCAAAATCCAGAAAGCAGTGGAATATTTTCAGGACAACAATCCTGACAGCCCAGAGCTCAACACGGTGAAAGCTCGGTTCGAGAAGGGCAAGGAGCTGCTGGAGGCTGAGTTTCGGAGCCTTCTGACCCGCTACAGCAAACCCGTGCCTCCCATCCTCATCCTCGACTTGATTGGTGGGGACGAGGAGCTGGACGTCCAGGAGGAGGTCACCCTTGAGCACCTGCCCGAGGCCGTGCTGCAGGACATCATCTGCATCTCCGGCTGGCTCGTAGAGTATGGCCGCAACCAGGACTTCATGAACGTGTATTTCCAGATCAGGTCCAGCCAGCTGGACCGCTCCATAAAGGGGCTAAAGGAACATTTTCGCAAGAGCAGCTCCTCCTCTGGTGTGCTGTACTCTCCGGCGGTGCAGAACAAGCGCAAGGACACACCCACCAAGAAACCCCCCAAGAGACCAGGCACAATCCGTAAGGCTCAGAACCTTCTGAAACAGTACTCTCAGCATGGGCTGGATGGGAAAAAAGGGGGCACTAACCTCACTCCTTTGGAAGGTCCACCCCTGTGTCTCGGCAGTAGCCCCAGGATAACTCCACTGTGTCTCCACTACTCTGGCACCCTGCTAGGTCATGATTACGACCTGAGGGTCAAACACCTCTCTGATGCCCTGAGTGAGAAGCACGGGGCTGTTGTGGGCAAAGATGACGTCCTGGACATTGAGATCGATTCCTATATCCACTGCATCAGTGCCTTTGTGAAGCTGGCCCAGAGCGAGTACCAGCTGCTCACCGACATCATCCCTGAACACCACCAGAAGAAGACCTTTGACTCCCTCATCCAGGAGGCTCTGGACAATCTGATGCTGGAAGGAGACAATATAGTGTCTGCGGCGCGGAGGGCCATCATGCGGCACGACTATTCCGCCGTGCTCACAATCTTCCCCATCCTGCGGCATCTGAAGCAGACCAAGCCCGAGTTCGACCAGGTCCTCCAGGGGACGGCCGCCAGTACGAAGAACAAGCTGCCCACTCTCATCACCTCCATGGAGACCATTGGCGCCAAAGCACTGGAGGAATTTGCAGACAGCATTAAGAATGATCCAGACAAGGAGTATAACATGCCCAAGGATGGGACTGTCCATGAGTTGACGAGCAATGCTATCTTGTTTCTTCAGCAGCTGCTAGATTTCCAGGAGACGGCCGGTGCCATGCTGGCCTCTCAAGAAACCAGTTCATCTGCCAGCAGTTACAGCTCAGAGTTCAGCCGGAGACTCCTCAGTACCTACATCTGTAAAGTGCTGGGAAATCTGCAGCTGAACCTCCTGAGCAAATCTAAAGTGTATGAAGACTCGGCTCTCAGTGCCATCTTCCTGCACAACAACTACAACTACATCCTGAAGTCACTGGAGAAGTCCGAGCTGATCCAGCTGGTGGCAGTGACGCACAAGAAGGCCGAGACCTCCTACAGAGAGCTGATCGAGCAGCAGATTCAGACTTACCAGCGAAGCTGGTTCAAGCTGAAAGATAAGGAACGTCAGATGATTAAAGACAAATTTAAGGGCTTTAACGATGGCCTTGAGGAGCTGTGTAAAATCCAAAAGGTCTGGGCTATCCCTGACAAGGATCAGCGCGATGCTATCCGGCAGGCCCAGAAGAGGATGGTGTCCGAAGCCTACAGAGCTTTCTTGCAAAGgTATGCTAACATCCAATTCACCAAGAACCCAGAGAAATACCACAAATACAGACCCGAACATGTGGAGGAGATGATCGAGAGGCTGTTTGATACATCGGCGGAGTATGCCGGAGAGAATGAGGAGGAACATGACAAAGCTGAGGACCAAAGTGACTCGGAAGGAGATGCGCTCCCCTTCTCCGCCCAGCGGCAGGAAAAAGCACATAATGTCCGCCAACATGATCAGCAAACTCGGGACGATGAGTGTCATAAGCACGTTTATGGACTTGGAGCTCATGCACACCTGCAGCACAACGAGAGAAGGAAGCAGACGGGTGGACATTGA

Function

symbol description
exoc7 Involved in telencephalon development. Predicted to be part of exocyst. Used to study microcephaly. Orthologous to human EXOC7 (exocyst complex component 7).

NR:

description
PREDICTED: exocyst complex component 7 isoform X4

GO: NA

KEGG:

id description
K07195 EXOC7, EXO70; exocyst complex component 7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013267 True 2498 mRNA 0.52 21 26588755 26608863

Neighbor

gene id symbol gene type direction distance location
AMCG00013270 NA coding upstream 24587 26557768 ~ 26564168 (+)
AMCG00013269 NA coding upstream 48901 26538899 ~ 26539854 (+)
AMCG00013268 NA coding upstream 58862 26524880 ~ 26529893 (+)
AMCG00013266 NA coding upstream 64449 26516304 ~ 26524306 (+)
AMCG00013256 chmp6,LOC108429718,LOC107690936,LOC106589902 coding upstream 184187 26398678 ~ 26404568 (+)
AMCG00013274 NA coding downstream 116371 26725234 ~ 26726439 (+)
AMCG00013273 kcnj2,LOC104928150,LOC107597836,LOC107704237 coding downstream 128691 26737554 ~ 26738834 (+)
AMCG00013275 NA coding downstream 245561 26854424 ~ 26856636 (+)
AMCG00013290 NA coding downstream 253895 26862758 ~ 26870903 (+)
AMCG00013285 nploc4 coding downstream 299928 26908791 ~ 26920057 (+)
G43138 NA non-coding upstream 744161 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 967516 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 968750 25619610 ~ 25620005 (+)
G43082 NA non-coding upstream 984517 25603998 ~ 25604238 (+)
G43081 NA non-coding upstream 987578 25600813 ~ 25601177 (+)
G43303 NA non-coding downstream 176090 26784953 ~ 26785561 (+)
G43326 NA non-coding downstream 263958 26872821 ~ 26930253 (+)
G43402 NA non-coding downstream 401509 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 661165 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1780826 28389689 ~ 28389960 (+)
G43263 NA other upstream 48706 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 110211 26427946 ~ 26478544 (+)
AMCG00013257 LOC106612075,LOC107560953 other upstream 192050 26367795 ~ 26396705 (+)
AMCG00013255 NA other upstream 329773 26254974 ~ 26258982 (+)
AMCG00013251 NA other upstream 427616 26153236 ~ 26161139 (+)
G43309 NA other downstream 199301 26808164 ~ 26811615 (+)
AMCG00013281 NA other downstream 283733 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other downstream 288646 26897509 ~ 26904963 (+)
G43434 NA other downstream 549439 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 776802 27385665 ~ 27415286 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location