AMCG00013271



Basic Information


Item Value
gene id AMCG00013271
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26647688 ~ 26649514 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013271
ATGAATATGACAAGTGCGCTAAACTTCACGGCTCCGGCCTGGAAACCCGAGTCGGTGATCATCCCGCTGGTGTTCTCGCTCATCTTCCTGGTCGGGACGGTGGGCAACAGCCTGGTCCTCGCCGTGCTCCTGCGCAACGGCCAGATGAACCACAACACCACCAACCTGTTCATCCTGAACCTCGGCGTGGCGGACCTGTGCTTCATCGTCTTCTGCGTCCCTTTCCAAGCCACCATCTACACCATGGACGAGTGGGTGTTCGGTCCTGTGGTGTGCAAAGCCGTGCACTTCTTCATCTACCTCACCATGTACGCCAGCATCTTCACGCTCGCCACGGTGTCTCTGGACAGGTATCTGGCAATCCGGTATCCCCTTCGCTCAAGAGAACTGCGAACACCCAAAAATGCCTTGACATCCATCTGCGTCATCTGGGGGCTGTCGCTCATCTTCTCCGGCCCGTACCTCAGCTACTATGAGCAAATCGACCTGAACGGGACTGTCATCTGCATCCCGGTCTGGGGGGTCCCACAGCGCAAGGTCATGGACATCTGCACCTTCGTCTTTGGGTACCTCATCCCCGTCCTCATCCTCAGCCTGACGTATGCCCGCACCATCCGCTACCTGTGGACCGCGGTGGACCCCCTGGAGGACATGTCTGAGTCCAAAAGGGCCAAGCGGAAGGTGACCAAGATGATCATCATCGTGGCCGTTCTCTTCTGCCTCTGCTGGCTGCCCCACCACCTGGTCATCCTGTGCCTGTGGTTCGGCTACTTCCCCCTCAACCAGGCCACCTACATCTTCCGCATCCTCTCCCACCTGGTTGCTTATGCCAACTCCTGCCTCAACCCCATCGTCTACGCGCTGGTGTCCAAGCACTTCCGCAAGGGCTTCAAGAAGGTCTTCAGCTGTATCCTGCACAAGAAGGTCATCAACAAGGTCCACGTGGTGCAAGTGGCCAACACGGTGAGCACCCTGGAGGCCGGCTCCACCGAGGTCTCCCACGCCAGCGAGCCACAGCCTGGGGCCTCCAGCGGCAGCCAGACCAGGAGACCATGGGGGAAGAGTGAGAGAAGCAGCTACCGAGGGAAGTCCCCCAGTACTTTCATTTCCTTCAACGTTACATAG

Function


GO: NA

KEGG:

id description
K04231 GALR2; galanin receptor 2

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013271 True 1125 mRNA 0.59 2 26647688 26649514

Neighbor


gene id symbol gene type direction distance location
AMCG00013272 NA coding downstream 33104 26607072 ~ 26614584 (-)
AMCG00013260 hid1,LOC104925062,LOC104944224,LOC108241245,LOC107710705 coding downstream 59588 26567270 ~ 26588100 (-)
AMCG00013261 NA coding downstream 96397 26550021 ~ 26551291 (-)
AMCG00013262 ush1g,LOC107556601,LOC107698769,LOC107664446,LOC107568596 coding downstream 135610 26501196 ~ 26512078 (-)
AMCG00013263 NA coding downstream 146923 26495936 ~ 26500765 (-)
AMCG00013277 LOC102221885 coding upstream 164344 26813858 ~ 26820977 (-)
AMCG00013276 NA coding upstream 181070 26830584 ~ 26832689 (-)
AMCG00013279 NA coding upstream 238974 26888488 ~ 26892418 (-)
AMCG00013278 NA coding upstream 254300 26903814 ~ 26906966 (-)
AMCG00013280 NA coding upstream 350060 26999574 ~ 27001457 (-)
G43204 NA non-coding downstream 280468 26366979 ~ 26367220 (-)
G43194 NA non-coding downstream 335544 26309353 ~ 26312144 (-)
G43184 NA non-coding downstream 389865 26254996 ~ 26257823 (-)
G43171 NA non-coding downstream 499055 26148416 ~ 26148633 (-)
G43165 NA non-coding downstream 527769 26119697 ~ 26119919 (-)
G43400 NA non-coding upstream 344858 26994372 ~ 26995304 (-)
G43410 NA non-coding upstream 396847 27046361 ~ 27046563 (-)
G43412 NA non-coding upstream 400054 27049568 ~ 27049842 (-)
G43417 NA non-coding upstream 406038 27055552 ~ 27059242 (-)
G43425 NA non-coding upstream 477266 27126780 ~ 27126988 (-)
AMCG00013264 NA other downstream 90364 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 163274 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 855929 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 869965 25776374 ~ 25777723 (-)
AMCG00013241 NA other downstream 1019436 25588487 ~ 25628252 (-)
AMCG00013295 NA other upstream 623715 27273229 ~ 27293073 (-)
G43473 NA other upstream 919250 27568764 ~ 27569151 (-)
G43594 NA other upstream 1418699 28068213 ~ 28072787 (-)
G43684 NA other upstream 1817798 28467312 ~ 28467906 (-)
G43869 NA other upstream 2603882 29253396 ~ 29254316 (-)

Expression



Co-expression Network