Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013274 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 26725234 ~ 26726439 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005242 | inward rectifier potassium channel activity | molecular_function |
| id | description |
|---|---|
| K05009 | KCNJ16, KIR5.1; potassium inwardly-rectifying channel subfamily J member 16 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013274 | True | 1206 | mRNA | 0.53 | 1 | 26725234 | 26726439 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013267 | exoc7 | coding | upstream | 116371 | 26588755 ~ 26608863 (+) |
| AMCG00013270 | NA | coding | upstream | 161066 | 26557768 ~ 26564168 (+) |
| AMCG00013269 | NA | coding | upstream | 185380 | 26538899 ~ 26539854 (+) |
| AMCG00013268 | NA | coding | upstream | 195341 | 26524880 ~ 26529893 (+) |
| AMCG00013266 | NA | coding | upstream | 200928 | 26516304 ~ 26524306 (+) |
| AMCG00013273 | kcnj2,LOC104928150,LOC107597836,LOC107704237 | coding | downstream | 11115 | 26737554 ~ 26738834 (+) |
| AMCG00013275 | NA | coding | downstream | 127985 | 26854424 ~ 26856636 (+) |
| AMCG00013290 | NA | coding | downstream | 136319 | 26862758 ~ 26870903 (+) |
| AMCG00013285 | nploc4 | coding | downstream | 182352 | 26908791 ~ 26920057 (+) |
| AMCG00013282 | NA | coding | downstream | 198127 | 26924566 ~ 26928580 (+) |
| G43138 | NA | non-coding | upstream | 880640 | 25807419 ~ 25844594 (+) |
| G43085 | NA | non-coding | upstream | 1103995 | 25620937 ~ 25621239 (+) |
| G43084 | NA | non-coding | upstream | 1105229 | 25619610 ~ 25620005 (+) |
| G43082 | NA | non-coding | upstream | 1120996 | 25603998 ~ 25604238 (+) |
| G43081 | NA | non-coding | upstream | 1124057 | 25600813 ~ 25601177 (+) |
| G43303 | NA | non-coding | downstream | 58514 | 26784953 ~ 26785561 (+) |
| G43326 | NA | non-coding | downstream | 146382 | 26872821 ~ 26930253 (+) |
| G43402 | NA | non-coding | downstream | 283933 | 27010372 ~ 27010651 (+) |
| G43438 | NA | non-coding | downstream | 543589 | 27270028 ~ 27417787 (+) |
| G43673 | NA | non-coding | downstream | 1663250 | 28389689 ~ 28389960 (+) |
| G43263 | NA | other | upstream | 185185 | 26524826 ~ 26540049 (+) |
| AMCG00013265 | LOC107672452,LOC107711237,LOC107567237,LOC107670476 | other | upstream | 246690 | 26427946 ~ 26478544 (+) |
| AMCG00013257 | LOC106612075,LOC107560953 | other | upstream | 328529 | 26367795 ~ 26396705 (+) |
| AMCG00013255 | NA | other | upstream | 466252 | 26254974 ~ 26258982 (+) |
| AMCG00013251 | NA | other | upstream | 564095 | 26153236 ~ 26161139 (+) |
| G43309 | NA | other | downstream | 81725 | 26808164 ~ 26811615 (+) |
| AMCG00013281 | NA | other | downstream | 166157 | 26892596 ~ 26923139 (+) |
| AMCG00013286 | pde6g,LOC102221623,LOC103367935,LOC102781464 | other | downstream | 171070 | 26897509 ~ 26904963 (+) |
| G43434 | NA | other | downstream | 431863 | 27158302 ~ 27158721 (+) |
| AMCG00013298 | NA | other | downstream | 659226 | 27385665 ~ 27415286 (+) |
