AMCG00013277 (LOC102221885)


Basic Information

Item Value
gene id AMCG00013277
gene name LOC102221885
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26813858 ~ 26820977 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013277
ATGAAAATCGCGTGGTGTGCGTGCAGTACATCATCCCGACACTcaaactgtgtctgtgtgtgtgtgagctctGTGCGTGTCGGCTGTGTGGGCCGCTCCCAGAGGGCTGGGGCCGCCAGGGTTGGTAAAAAGAAGAACCCAGGTTTGAAGCTCTCTAAGGAAGTCTTCGAGCAGCCTGCAGCCACTGCGGCTGCACCCAGAGATTTGGACTCCAAAGCCTGTGTTACCATTGGGGAGAAGAACTTTGTGGTGAAAGCAGATGACCTGGAGCAGATCGGCGAGCTGGGCCGAGGGGCGTACGGCGTGGTGGACAAGATGAGACACGTGCCCAGCGGTCTGATCATGGCAGTCAAGAGAATCCGGGCGACTGTGAACACGCAGGAGCAGAAGAGACTCCTGATGGACCTGGATATCTCAATGAGGACCGTGGACTGTTTCTACACCGTGACTTTCTACGGCGCTCTCTTCAGAGAGGGTGATGTCTGGATCTGCATGGAGCTGATGGACACTTCTCTGGACAAGTTTTACAAGCAAGTAATTGAGAAGGGAATGACGATCCCCGAGGACATCTTGGGAAAGATCACCGTCTCCATTGTAAAGGCCTTGGAGCATTTACACAGCAACCTGTCCGTGATTCACAGAGATGTGAAGCCCTCCAATGTGCTCATCAACACGCAGGGCCAGGTCAAGATGTGTGATTTCGGGATCAGCGGCTACCTGGTGGACTCCGTGGCAAAGACCATGGATGCTGGCTGCAAGCCCTACATGGCGCCTGAGAGGATAAACCCAGAACTGAACCAGAAAGGCTACAACGTCAAATCCGACATCTGGAGTTTAGGAATCACCATGATTGAGCTGGCGATCCTGCGCTTCCCCTACGACTCGTGGGGCACGCCGTTCCAGCAGCTCAAACAGGTGGTGGAGGAGCCGTCCCCCCAGCTCCCCGCCGACCGCTTCTCCCAAGAGTTTGTGGACTTCGCTTCCCAGTGCTTGAAGAAGAATTCCAAAGAGAGGCCGACCTACACAGAGCTCATGCTACATCCTTTTTTCACCTCCCACGACGCCAAGGAGACGGACGTTGCCAGCTTCGTCAAGGTCATCCTGGGAGACTGA

Function

NR:

description
dual specificity mitogen-activated protein kinase kinase 6

GO: NA

KEGG:

id description
K04433 MAP2K6, MKK6; mitogen-activated protein kinase kinase 6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013277 True 1113 mRNA 0.55 12 26813858 26820977

Neighbor

gene id symbol gene type direction distance location
AMCG00013271 NA coding downstream 164344 26647688 ~ 26649514 (-)
AMCG00013272 NA coding downstream 199274 26607072 ~ 26614584 (-)
AMCG00013260 hid1,LOC104925062,LOC104944224,LOC108241245,LOC107710705 coding downstream 225758 26567270 ~ 26588100 (-)
AMCG00013261 NA coding downstream 262567 26550021 ~ 26551291 (-)
AMCG00013262 ush1g,LOC107556601,LOC107698769,LOC107664446,LOC107568596 coding downstream 301780 26501196 ~ 26512078 (-)
AMCG00013276 NA coding upstream 9607 26830584 ~ 26832689 (-)
AMCG00013279 NA coding upstream 67511 26888488 ~ 26892418 (-)
AMCG00013278 NA coding upstream 82837 26903814 ~ 26906966 (-)
AMCG00013280 NA coding upstream 178597 26999574 ~ 27001457 (-)
AMCG00013292 NA coding upstream 324670 27145647 ~ 27159340 (-)
G43204 NA non-coding downstream 446638 26366979 ~ 26367220 (-)
G43194 NA non-coding downstream 501714 26309353 ~ 26312144 (-)
G43184 NA non-coding downstream 556035 26254996 ~ 26257823 (-)
G43171 NA non-coding downstream 665225 26148416 ~ 26148633 (-)
G43165 NA non-coding downstream 693939 26119697 ~ 26119919 (-)
G43400 NA non-coding upstream 173395 26994372 ~ 26995304 (-)
G43410 NA non-coding upstream 225384 27046361 ~ 27046563 (-)
G43412 NA non-coding upstream 228591 27049568 ~ 27049842 (-)
G43417 NA non-coding upstream 234575 27055552 ~ 27059242 (-)
G43425 NA non-coding upstream 305803 27126780 ~ 27126988 (-)
AMCG00013264 NA other downstream 256534 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 329444 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1022099 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 1036135 25776374 ~ 25777723 (-)
AMCG00013241 NA other downstream 1185606 25588487 ~ 25628252 (-)
AMCG00013295 NA other upstream 452252 27273229 ~ 27293073 (-)
G43473 NA other upstream 747787 27568764 ~ 27569151 (-)
G43594 NA other upstream 1247236 28068213 ~ 28072787 (-)
G43684 NA other upstream 1646335 28467312 ~ 28467906 (-)
G43869 NA other upstream 2432419 29253396 ~ 29254316 (-)

Expression


Co-expression Network