AMCG00013278


Basic Information

Item Value
gene id AMCG00013278
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26903814 ~ 26906966 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013278
CTACAAACTTGTACAGCCCTTACTCCTACTCCGAGAGGAACGGTCTCATTCTCCCATCTACAACTACAGAGACATCCTCCACCTTGGGATTTTACTGGTGGCAGTTCTGAGTCTTACAGTATGGGGTGGTACCTGGAAGGAAGACGTTTTCCATTCTTCTGGATGAAGAGGAGTGCAAGTCAGAGTGATGAGACAAGTCTTCTGATACCaaagGGTAACAGGTATAAGGAGTTGTTAGCACCGATTGCATATGCAGACTCTGGAgacaggTATGAAGTATCCCCTAAAGAGACGAAGATACAGCAAGAGCAACCAAATCCCCCTGGATTTGATAGACATGGAGGAAATACAGCTGTCACCTCACTGCTGTCCAGGCTGATGGGGAGAATGCGACCCAGGAAAGAAGTGTTCTGGAAGAGGACAGCACCGAAGGCAGAATTGGATCTCCGCTTTGGACCACGGCAGGAGTGGAAACCCAAGAGCATGGCCAACTGCTGTCTGAAATACCTGCTGTTTTTTAGCAATCTTACCTTCACTGTACTGGGTTTGTTGACACTGGCCATCGGGCTGTGGGGCCTGGTGGACAAGGAGTCTTTTGCCCAGGAGAAAATTGGGCACATCGGCTCTGACCCCATGTTGCTCTTCATGACCCTAGGGCTCATCCTCTCAGTGCTGTGCCTCTCGGGCTGTGTCGGCGCCCTTCGGGAGAACCAGTGCCTACTCAAGGTCTTCTCTGTGGGAGTGTTGGTCCTATTGACCCTGCAGATACTGTCTGCCATCGTGGCATACTCTCTCCGGGATCAGATTGAGGGATACCTGCGTGACGGCATGATTATTGCCTTGAGACGCTACCAGGATGACTTGGATCTGCGCTTCATCATGGATGAAATCCAGACTGGCCTGCGGTGCTGCGGGGCGGACAGCTATCGTGACTGGGAGCTCAACGTTTACTTTAACTGCACCGCTCCCGGTATCCAGGCGTGTGGCGTGCCCCCCTCCTGCTGTGTCAACCCCCTGGAAAACGGCACGGTGTGGAACTCGCAGTGCGGACTGGGGGCCCAGCGGCTGGACGAGTTCTCGGCCCAGAGCGAAGTCTACCTGGGCGGGTGCTTGGGTGGCATCTCACGCTGGATTGGGCAACATACGGGCACTGTGGGTGCAGTGGGCATTGTGCTCCTGGGTGTTCAAGTCGTGAGCCTGTTCATTACCACCCACATGGTGGACAACATTCAGCAGAGCAAAGCATACTGGCAGGGTGACATGTGATTGCTCTCTAGCAGTCACTTACACAGTACTAAGAAAGGCAATGTTctatttattaaaacacttcaagGTTTGTGAACACAAATAATATGTCATGGAaagatattttattgaaaactcATCTTGCAATATAGAATCAGAAGGTGTTGGGACTCAGAAACCTGATTATACAGcccagcatttaaaataacaccaaaGAATCAAACTTAATCTGAGGGCTTTCTTCCTCACAGACACAATCAGAGCTGATTTCATGGAGCCAGATTAGTACTTGTCTTGGACTCAATGTAAGTTTAGGTAGGGTAGTCCAGGACTGGTGTCAGTCCTCGTCTGTGAAACCAACTGGCACCCATCATGGAAAGcttagtattgttttaaatacgtACTCCAGCCAGTAGAGGGAGAGTCTTGACTATTCCACACATGAAGAATACCAGTTTAACTAGCTAAACCTAGCTGTTGTGGTGCAGTGCTAGATAGTATCCTAGAAACACATTGCAGAAAtatcattaaatgtttaataggtTATAAATAGCAAACTCTTTTGAACAAGTAATAAGAAATAGCTCTTCATTGGGATATGTTGTGGGTTTGATAAGATTAAAACAGGGAAGTAAGGATCAGTAAGGGTCATCAGTTTTCAGGCACTGCAGATAAAACGAAAGGTTGAGGACTAGACTATATCAGTTTCTTCTGTGTAGTACACATTCATGTAAAAGAGTAATTCAATTATCTTTGGcaagttgtattttgtaaagaatataatcacaatgtgttttatgtatACTAAAATTACTTTCTAAAgaacactgaaataaacacacagaaaatgaa

Function

GO: NA

KEGG:

id description
K17351 TSPAN10; tetraspanin-10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013278 True 2097 mRNA 0.46 4 26903814 26906966

Neighbor

gene id symbol gene type direction distance location
AMCG00013279 NA coding downstream 11396 26888488 ~ 26892418 (-)
AMCG00013276 NA coding downstream 71125 26830584 ~ 26832689 (-)
AMCG00013277 LOC102221885 coding downstream 82837 26813858 ~ 26820977 (-)
AMCG00013271 NA coding downstream 254300 26647688 ~ 26649514 (-)
AMCG00013272 NA coding downstream 289230 26607072 ~ 26614584 (-)
AMCG00013280 NA coding upstream 92608 26999574 ~ 27001457 (-)
AMCG00013292 NA coding upstream 238681 27145647 ~ 27159340 (-)
AMCG00013294 LOC106589628,LOC102791232,LOC102301473,LOC101472949,LOC100695060,LOC101161443 coding upstream 392861 27299827 ~ 27307855 (-)
AMCG00013293 NA coding upstream 429324 27336290 ~ 27339310 (-)
AMCG00013297 NA coding upstream 591709 27498675 ~ 27508068 (-)
G43204 NA non-coding downstream 536594 26366979 ~ 26367220 (-)
G43194 NA non-coding downstream 591670 26309353 ~ 26312144 (-)
G43184 NA non-coding downstream 645991 26254996 ~ 26257823 (-)
G43171 NA non-coding downstream 755181 26148416 ~ 26148633 (-)
G43165 NA non-coding downstream 783895 26119697 ~ 26119919 (-)
G43400 NA non-coding upstream 87406 26994372 ~ 26995304 (-)
G43410 NA non-coding upstream 139395 27046361 ~ 27046563 (-)
G43412 NA non-coding upstream 142602 27049568 ~ 27049842 (-)
G43417 NA non-coding upstream 148586 27055552 ~ 27059242 (-)
G43425 NA non-coding upstream 219814 27126780 ~ 27126988 (-)
AMCG00013264 NA other downstream 346490 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 419400 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1112055 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 1126091 25776374 ~ 25777723 (-)
AMCG00013241 NA other downstream 1275562 25588487 ~ 25628252 (-)
AMCG00013295 NA other upstream 366263 27273229 ~ 27293073 (-)
G43473 NA other upstream 661798 27568764 ~ 27569151 (-)
G43594 NA other upstream 1161247 28068213 ~ 28072787 (-)
G43684 NA other upstream 1560346 28467312 ~ 28467906 (-)
G43869 NA other upstream 2346430 29253396 ~ 29254316 (-)

Expression


Co-expression Network