AMCG00013289 (cep131)


Basic Information

Item Value
gene id AMCG00013289
gene name cep131
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26963688 ~ 26981369 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013289
GTCAGTTGCAACAGTTTCTGTCTGTGATCGATGGGATACAAATTGGGATGTGCATTAACTTTTCCAGTTGTTTTGGATGAAGCTTCAAAGGAGGCggttatttatttgtcatttggGCTCATTGGGATTATATAATAGGCCTAAAACGTGTATCGATCAGTCTAATGGAGAGAAAGACGGGCGATGTAATATATATAGTGCTGTATCCATCAGTGATACAAAATTGAGCTTTAATTGCTAAATTACTGTCTGATTGTAAAGAAATGATCTGTATCGGGCTGTTTACGAATATAtgcatcatttttattatttgcttcAGTTTTAGATTGAAAAGGAGAGaagattattgatttatttattttgtatttgattcaGTCTTCGAAGTGTGTAATTGTGGGGCTTGTTTTGCaaagaacaacattttttgCAAGTCAAATGATAATACCAGtaagatgtattattatgttttatcaaTAATGACTTAGTGTATCTTGTGACAACCTTTTGATTGGTTTTAACGTTGTGTGCATTGGCACTACTTACTACGTGTTTAATACAGTGCACAGTTTAATGAATGGGGATACATTAATCAgagtatacattttatacatcatAAAAATCAGTTCATTAATCAACCAAACTAACACGTTACTGGTTTCCTGCTTGCGAAAACATCGTCTCACGACTGGACTGGAAATACTCAAGGTCCGTTGAGGATGCACTCTGCCCGCAGCCCGCCCTCTCTGCCTGGCAGCGTCTCGGTGGGCGCGGGGGACGCCCTTGATCTCAGCCTCACGGGCTCCCAGCTGTCTGTGTCCCGCAGACCAAGCAGCGCATCTCCGGCCAAACAGTTCTCccgctctgtctctgtctccctcgCTAGCGACAGCAAGGGCAAGCGCAACACCCTGGCAGAACCCGGCCTGGGCAGCTCTCGCTCCATCAAGAATTTGCGGAGGTCAAACAGCACCACACAGGTCAACCAGAGACCCAAACCCTGCGTCAGTGAGGAGCCACCAGACGACTTCCTGGCCTTATTCGACAGCAGCTCTGATGGCCGCAGGAAGCTGGCCAGCCTGAGCAAGACCTCCCCTGACCGCACCACCTGGAACATCCTGGATGACCAGCCCAGAGTTTTCCCCACGCCTGGCAGTGCCCGCAGAACCAGCACCACCGACTCGCCAGCAGGTCTGAAGAGGAGAGAGGCTGCAGTGGCCCTCGCTGCCAACTTCACCGCCAATAACAGgAGTAACAAAGCAGCCGTGGGGAACTCTGTGACCACCATCCTGCACAACAACTACTCCGACAAGCCCCTCACCCCCAAGAGCTCCAACCAGAAGCCATCTTTCAATAACATCATCAAGGCTACAGTCAATGACGAGGGCCCTCTGGAGAGTGCCTCACTGACCAAGTCTCAGAAGAACTTCTCCTCCCCCAATAACAACGCGGCGCGCAGCAGCCCCTCCCAGCTGAGGAGACGGGAAGTAACAGAGGAGGAGGCGGAAAGGTTTATCCAGCAGGTCAACCACGCAGCCGTCACCATCCAGCGCTGGTACAGACGCCATGCGCAGAGACAGCGTGCCAACGAGGCGGCCCTCAAACGCCTGCTGACCACCAAGAAGCAGGAGAGGGAGCAGAGAGCGGAGGGAGGGAAGGCGCAGGAAGTGCTAAAGAAGAAAGAGGATGACCGGAAACGCATTCGGGAGGAGAAGGCACGACTGGCCAGGCGAGCTGCTATACAGGAGCTGCAGCAGAAGAGGGCCCAGCGAGCCTCCGAGGCCCAGCGAATCGCGGAGGAGGAGATCGAGGCCCTGAGGCAGTGTGGGAAGGTGGGCCGAAAAAAACCTGCAAAGCTGTCTCCTAGCAACAAGGGTACTGGTGCAGCCGGCGACATCAAGGCCAAGAACATGGACTCCAATGTGAATGTTTCCGCTGATGTTGATGATGCTTCGAACCTGAGATCAGGGTCCCCCACTGACTCCCCGGGCAGAGGGTCCCAGTGCTCACAGGAGCTGGTGCACAGCGCAGTGAGCCACGAGGAGCAGCGGCAGACGGCACCATCCAGCAGAGCCCAGTCGAAAACCACTCTGAACGACCTGCTGGATACCCTCAAACTGCTGGAGGAGGAGCCCGAGAAACTGCCTGAGCCCAAGAGCTACAGGAAGGAGAAGTACTCCTGGATTGATGAAGACGCAGATTCCAACTCGCTGACGGCCGACAACCTGGAGCGCCACGGCAAGCTGAGCCAGTCACCTGCCCTGCCAGACGGGGGCGCCCTGCTCTCGGAGGCCAAGCTGCAGAGTATCATGAGCTTCCTGGACGAGATGGAGAAGTCCGAGCAGGAGCGGCCGCGGTCAGTCACCTCAGGGTCGCTCCGAGAGgtgctgctgtctgaggaGGAGCTGGCGGGGGTGGAGCAGGCCTCGGCGACGGCGGCGGAGGTCACGGGCTCCATGATGAGGGTGAAGCTTGAACTGGAGGAGAAGAGGCGGACTGTGAACATGCTGCAGACCGCGCTGGCCCAGCAGCGTGAGTTGACCGTCCGACACGTCAAGGAGACAGAGAAGGAACTCAACCGCAACTTCCAGCTGCAGAAAGAGCAGTACGAAGCCACCATCCAGAGACACCTGGCCTTCATAGACCAGCTCATTGACGATAAGAAAGCCCTGAGCGAGCGCTGTGAGGGCGTGGTCACCGAGCTCAAGCAGGTGGACCAGAAATACACCAAGAAGATCGCCCAGATGCAGGAGCAGCATGACTTGGAGATCAAGAAGCTGAAGGAGCTGATGAGCGCCACCGAGAAGATCCGCAGGGAGAAGTGGATCGATGAGAAGACCAAGAAGATTAAAGAGATCACTGTGAAAGGGCTGGAGCCGGAGATCCAGAAGCTCATCGCCAAGCACAAGCAGGAGCTGAAGAAGCTCCGAGCCGTCCACGAGGCCGAGCTGCTGCAGGCGGACGAGAGGGCGGCCCAGCGGTATGTGCGACAGACGGAGGAGCTCCGCCAGCaactggagagggagaaggaggagcagTGCCAGCGGGAGAGGGAGCTCGCCAAGCAGAGGTATGAGAAGcagctggaggaagaggagacagCTCTGCAGCAGCAACGCCGGCGGCTCTACGGCGAGGTGGCCGAGGAAAAGGAGAGACTAGCTCAGCTGGCGGCCAGACAGCGTGCTGAACTGGATGAACTTAGGAGGcagctggaggacaacagctcTCTGGCGGGGCGGGCGCTGCGCGAGGAGTTCGACCGGACCCGCgaggagcaggagaggagaCACCAGgCGGAGATAAAAGCCCTGAAGGAGAGGCTGGAGATTGAGAAGCAGGCCTGGGAGGAGAACTACATGAAGAAGGAGGAGGCGTGGCTGTTGAGCCGCGAGCGCGAGCTGAAGGACGAGGTGCGCAGGGGGCGGGACAAGGAGATTGAGTTGGCCATTCAGAGGCTCGAGGAGGAGACGAGCGGCGCCAGGGACGAGTGCGAGAGGGCCGCCGAGAACCGGGTGAAGCGCGTGCGGGAGAAGTACGAGACggagctgcaggagctggagagaTCCGAGAGGAACCTGCAGGACAAGCACAACGAGCTGAAAAAGCGTCTGAGCGAGACGGAGGGGGAGGTCATCCGCCTGCAGGGTCTCCTACGGCAGAAAGAGCAGGAGGTCCAGGACATCACACAGATCAGAGACCGGCTGGCGGACGAGCGGCGCAGCCTGGCCGACGTGGTCCGGCAGGAGTTTGCCGACCGCTTGGTGGCCACGGAGGAGGAGAACCGGAGAATGAAAACGGAGGTTTCCGAGACCAGGGCCCGTCACCGACTGGAGGTGGAGAGGGTGACCCgtgagaaggaggaggaactGGCGGAGGTCCATGAGAGggTGAAGGCAGCCATTTTGAAGAAGGAAGAGACAGTCAATAACTTGCGGAAGCAGCATGAAGCGGCACTGAAAAGAGCTGATCACTTGGAGTCCTTGTTGGAGCAGCAGCGAAAACAGCTTCTGGGGAAGTGAACGAACAGGAACACACCGGCATTGTGCCCagatattttcagttttttcttccttggacCAACAGAGAAACTGCAGGGGCCTGTCTGCACACTCCGGGTTCTCTGAGTCCTTAAATCTCACGGTGGAACGCTAGTTGTGCTAATTTTAATGTTCAGGAAGTCATGATTGATAAAAGTATCCTGTGGAAACTGTCTGGAAATGGCACTACAACTTTATTTTCCCACATTCCCTGTAGGAACCGGCCTCCAAAGTTGCACATTTCACCCGAGCACCACCCTGATGGAAGCCAGTGCCCCAGTCAACGAATGCTTTGAAATGCTGAGGGCCAAAGTATTTCAATCCCTCAGTAAAAGCAGAACATCCAGCATATGATAAATTCAGACTTTTCTGTGGATCACTTTGGAAGAACATTCTGCtaattttaaaaccatataATGATCATCCAGcactataatatatttttctgtcctATAAAAAATGTTCTAAAAAGACCTTCCAGATGTTCACAGCTGCTTGGTGTTGTCACAGGGTTTCCACAGCTTGTGCTCGAGTCGCTTTGTGGACACTGCAGTGGTATGCTTGGCCTGTGTTTCTGTGATGTGAGCGCTTGTCTACAAACTAGAAGACACCAATTTACTTGTTTGGCCGACACATTTCATTCACACATTCACCCACAGATCTTACTAAGGAACCCGACCTGCTTCTCCCAatgttactgtactgttttgtaTGTAAAGGGTGTGTTCAAAGCTTGAGTAAAGTTTAAAAGTGCTAGAGAACTTCTGAGTATTTGGCAGAGTAGTTTTGGAAGTATGGAGAGGAATTGAATGCAGGGAAGAAATGAGGAATGGAAAATTGCATGAAGTGATACAGATCAGTAGGAGCTGAGTACGGGACTAAATAAAGGAAGGCGAGAGAAAGGGAAAGGAGAGGAAGTAAAGAGAAAGGAGGGACTGAAAGAAGGAGTGGAATTGGGGGAGTGTGGGAAGGTTGTTAGAAGGTACTGGAGGAGTTTCTTATGGCATTGAGCATGTTGACAGCCATTAGTATAGTTTCTGACTTAGTCTTTACAAAGTGGCTAACAGGCACACTGTAACCATGTGATTGTCTTAGTGTTTCAAGTCTTAGTGGTCTTTTGGCTTTAACAATCTTCACTGACAATCGGGTCATATTGTTGAAGTCCACAGCTGTAGGTAAGACTTTTTGGTCCAACAGTTGGAAGTAGTTAGCCTTTAAAGTCAGCTGTTCAAAGCCTGAACgcccttacacacacacacacctataaaagaaaatattttaactaGAACACAGAACAATCTGGGCATGACGGATAAAGCTGGTTTCGGTTGTTCATGCCAGATGTCTTCAGAAGATAAAAATGTGGTAAGCATCCAAGCAGTGGATGAGGTATTTTCACTTTTTGAGGATctatcttgttttgttttgttttgtaatggatGTAATCTTTGTTCTGGTAATGAACTCAGAATGCCGTCTTGAATATTCAAGGCTGTGGGATAATAtgaaaaatgtctttattaatcCTGCTGccttctgcatttttttccGTGCTTGTgaaatgcttgtgtttttgcTCAACCCACCATTGTCTTGCAGCCaggcttttctttctcttttcctgtTGAAATTGTCATCATTGAAGTCAGAAAACATTGACTCAAACTGCAGGTCTcctaatttcatatttaatatgagCATAACATTTCactgttatttttctgtatgaaccacttttgtttttgtactgtatgtgtCTCAATGTGCTGGTGAATGTAgatccttttaaaatgataaacattttctaaaaatacttCTTCACTGAAAGCAATATGTGAGTGTTACTTTTTCGGAAAGTCCCTCACAATGAGTTGTGCTCCCCCTCACGAAAGTTCACACTTTCGTTCCCCGTTACAGATTCATAGCTGCCTCTGCGccagaaaaacatgtttgtttctctctgtcttcacactctgaggaagaaaaaagaccaaacaaacttattttaataatagaaCTTAAAAGCTTATTTTCCAGACTTATTGCCCAATTCTCTCTATCAGACCTCTCTGTGAAATAATTTCCATTTCTCCATCATTCTTTAACTATTTTGGGACCTTTTAGACTGAATCACTACAGCTACTAGGAAGAAAAAATACTGACTGAAAAGTGACTAATAAGAGTGACCACAGTTGAAGACTGTTTGctacttatttattgtatttgtgaaGTAGTCTATGTAAACATAACAATTTTTTGCACTctcaacattaaaaacaacaacaaaactgcatgtgaaaaatgcttttttaaattgtaattttagtaAATAGGACAGACAGATCTGCACTGAAGTTGAGGCTGCGTGAACATCCTATACTGTTAATTTTCACTTCCTTTGTTTTACTCtctgattttaaaacacattgttaAAGAACAAAAGCAAACCAGCAAAACAGGACATGCCTTTTGTGAATTGC

Function

symbol description
cep131 Involved in several processes, including Kupffer's vesicle development; intraciliary retrograde transport; and melanosome transport. Acts upstream of or within cilium assembly and epithelial cilium movement involved in determination of left/right asymmetry. Predicted to be located in several cellular components, including acrosomal vesicle; chromosome, centromeric region; and cytoskeleton. Predicted to be active in centriolar satellite. Used to study Bardet-Biedl syndrome. Orthologous to human CEP131 (centrosomal protein 131).

NR:

description
PREDICTED: centrosomal protein of 131 kDa isoform X2

GO: NA

KEGG:

id description
K16540 AZI1, CEP131; 5-azacytidine-induced protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013289 True 6517 mRNA 0.49 26 26963688 26981369

Neighbor

gene id symbol gene type direction distance location
AMCG00013284 NA coding upstream 500 26929259 ~ 26963188 (+)
AMCG00013282 NA coding upstream 35108 26924566 ~ 26928580 (+)
AMCG00013285 nploc4 coding upstream 43631 26908791 ~ 26920057 (+)
AMCG00013290 NA coding upstream 92785 26862758 ~ 26870903 (+)
AMCG00013275 NA coding upstream 107052 26854424 ~ 26856636 (+)
AMCG00013291 NA coding downstream 306 26981675 ~ 26998680 (+)
AMCG00013283 LOC108429730 coding downstream 55246 27036615 ~ 27058921 (+)
AMCG00013287 tekt3,LOC107753251 coding downstream 130481 27111850 ~ 27117437 (+)
AMCG00013288 NA coding downstream 148795 27130164 ~ 27140599 (+)
AMCG00013296 NA coding downstream 567436 27548805 ~ 27569295 (+)
G43326 NA non-coding upstream 33435 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 178127 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 1119094 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1342449 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 1343683 25619610 ~ 25620005 (+)
G43402 NA non-coding downstream 29003 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 288659 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1408320 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1756754 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 2168609 29149978 ~ 29151334 (+)
AMCG00013281 NA other upstream 40549 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other upstream 58725 26897509 ~ 26904963 (+)
G43309 NA other upstream 152073 26808164 ~ 26811615 (+)
G43263 NA other upstream 423639 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 485144 26427946 ~ 26478544 (+)
G43434 NA other downstream 176933 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 404296 27385665 ~ 27415286 (+)
G43476 NA other downstream 607770 27589139 ~ 27590818 (+)
AMCG00013310 NA other downstream 947339 27928708 ~ 27935938 (+)
AMCG00013317 NA other downstream 1026145 28007514 ~ 28072799 (+)

Expression


Co-expression Network