AMCG00013291


Basic Information

Item Value
gene id AMCG00013291
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 26981675 ~ 26998680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013291
gggggtaggcgGGGGTTGTCCTTCTTGCAGCTGTTGTTAATTTCAGTCATACCCTCCCATTTGCCTGGATGTGAACGGTTTCTTTTAGAGTGCTATGGTAGTCCTCAGCAGTTCAGCAGTGCAGTCGGCCACACCGTGCTTGCTgGTTGGCTAATAATTGGAGGCCACCCCCATCTTTTCAATCCTGCATCATATGGCAgaatacagaaaacacattgCTCCTCCTTTTTCTCCTCATCTGATGTCCCACTCGTGACTCACCCTGGGCTACTGAAAGCAGTCATGACACTGCTGTTTGGGAACTATCAGACAAAAATGGGCTGCCTTTCGCTAAAGAACCTGGCGTGCACTTTCTCTGTGGCCTGTTTGGTGTTGACCCTGTCTTACATTTCTCTCGGCATGTGGTCTGGTGGTGGTCAGTGGAGTCGGCCTGACAGTTTCCTCTATCCCATCAGgtCAAACGTCAAGCACAGCACAGAACCGCAATGCAAACAGTGCGACGAGTCAACGCAGAAGCCGGCGGGCAACGACAGCGCTGCCAGCTCTCACCAGGCCGGGCTCAGCGGGGCACCGGCCGGTCACCCAGCGGCGCCAGAGGCACAGAGCAGCAGCACCCGCTCCGCCCCGGCCCCGCACTCTGACCCGCCAGCCACAGCTGCTGCGCAAACGCAAATGAAGCCAACGCCACCTAAACCAACCGATCCATTCATAGGAGACCGTTACGCCAAACAAGATCTAGAGCCACAAACGAAATGCGCAGACAGCATTCGGAGCAGGTTTTTGAAAAGCGGTTTCAAGGAGAAGTTCCTGGTGTCGGTCCCTGTCCTGCAGTGGAAGAAACACGCCACCAACCAGGAGTACCAGAGGCTGCGGCACTACTATGGAGCCTTTGGCTGGGGTGCGCTGTCTTTTGACACTCTGGTGcagtctctgtctgtcctcaACACTATGGACAATCTGCGCATGTTCGATGACTGGGAGAGCAGGCCTGCCCGATCGCCGTGTATCCGCTGTGCGGTGGTGGGAAATGGTGGGATACTGAATAACTCCAAGAAGGGCAGGGAGATTGACCAGCATGACTACATCTTCAGAACAAACGGGGCTGTGATCAAAGGGTTTGAGGAGGATGTAGGAAACCGGACGTCCTTCTATACGTTTTCCACCAACACCATGCAGAACTCTTTGCGTAGCTATGCTAGTGAAGGGTTCAAGGGGCTGCCCCTAGCTGAGGAGACTAGGTACATCTTCCTGCCAGACCATGACCGTGACTACATCCTGCTGAGGGCTGCAGTCACCCACACGCCCATAGAGAAGGGACCAGAACGTTCTAAGAAGTTCCTACGATCAaatatcttaaaaacaaaatataaaaatttgTACCGCCCATCGACGGGGGCCGTTATGCTGTTGGCAGCTGTGCACACATGTGACCAGGTGAGTGCCTACGGCTTTATGACGCCTGATTACAAGAAATATTCCAACCACTACTACGACAGCTCCTACCATGAGGTGGCCTTCTATGTCAATCACGACATGCGCATGGAGATGAGCTTATGgcagcagctccacactgcCGGTATCATAACGCTGTACATGCGGAACTGAGCATCCTCTGCCACTCACCATGGAAATGCCAAGAACCTCCCGTCCTGGGACTTTTGGCCGGATGCCCagattaagtaaaaaaaaaaaaaaagaaacctgtaaCCTGCAGAGGGTGAAGGGTGAAGAGACAGGCAGAAAAAACCTTgagctattttatttaatatatatttttatacattaaattatttttttattcacaagAGAGTGACTTTTGTTCTTGTCACTTAGCTGTCTTGTCTGTGAGTTAGCAGATGGACCTCACCACCGTCACTCCTAGATATGGATTGCTTCTGGGGGGCTGATGTTAGATGTGTTCCTGTCCACTTCCATCGTTATGTGTCCATTCATTACACCTGTTCTAATGAAACTGACTTTTATGCAGAAAACATGTATGGACCTctggagatttgttttttaaatagtgaGGATTGTTGGAGTCTGCCTCCCGAAGTATCAGCTCTTACTTGTACTACAGGGAGCAAGCAGCACTTTGAGTTTTTGGACATGAATGTCTTCATATGGATGTTTCAGAGAgaatctttttttaatccacATCACATCcgcatttattatgttttatttcttgtcagtGTGTATCCTGTCCTATCATCCGGTTTAAAGTAAAAGAGCTGCAATAAACACACTCCGTCCATATGTTAGCTGACTGGAACTAGTTTAATCTGGTTGCAAATTGTATCTTTGTTTGCCCTGTTTTAATCGTGTCTGTATGTGATTATGATTGTTTGTGTCAATGTGTTTGTGATTTACTGTACAGAACAGAAGTGATTAACCACTGAAAAAAGAGAAGCTTTATCCACAGTGTTTTATTGACaaattatataacatttacaCAAATGACTTCAGTCGTTGAATATAGATACTAAGATTCATGTAACAAAGaataatgtacatattaaaaagCTGCACAGCCATCAGGATATGTCTCAAAGAAATGTGAAGGAACTCCAAAGTATAATTTCTGCAGTATTTCTAAAGGACAAGCATAAttcttcataaaatataaaggCAAGGAAATACTGAACAATTAGCACTCAATCCCAACCACCCACTCATCCCttctcttaaaaaagaaaaaaaaaaaaaaaaaagtcatattttGGCAGTGTGTCATCTTGAGCTGATTACAAGTTGTCAGGGCTAGGCTGCAATGAAAGAATAACTACACAATGATCATTTTTAGTAATTGTATACCATCAGAGCAACTTTGACTTTTTTAAGAAtgtctattatatatatatatatatatatgaaaacatcaaaataaatgggtgtc

Function

GO:

id name namespace
GO:0043412 macromolecule modification biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013291 True 2899 mRNA 0.45 9 26981675 26998680

Neighbor

gene id symbol gene type direction distance location
AMCG00013289 cep131 coding upstream 306 26963688 ~ 26981369 (+)
AMCG00013284 NA coding upstream 18487 26929259 ~ 26963188 (+)
AMCG00013282 NA coding upstream 53095 26924566 ~ 26928580 (+)
AMCG00013285 nploc4 coding upstream 61618 26908791 ~ 26920057 (+)
AMCG00013290 NA coding upstream 110772 26862758 ~ 26870903 (+)
AMCG00013283 LOC108429730 coding downstream 37935 27036615 ~ 27058921 (+)
AMCG00013287 tekt3,LOC107753251 coding downstream 113170 27111850 ~ 27117437 (+)
AMCG00013288 NA coding downstream 131484 27130164 ~ 27140599 (+)
AMCG00013296 NA coding downstream 550125 27548805 ~ 27569295 (+)
AMCG00013299 ndel1,LOC108432229,LOC104940291,LOC107672491 coding downstream 594095 27592775 ~ 27609468 (+)
G43326 NA non-coding upstream 51422 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 196114 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 1137081 25807419 ~ 25844594 (+)
G43085 NA non-coding upstream 1360436 25620937 ~ 25621239 (+)
G43084 NA non-coding upstream 1361670 25619610 ~ 25620005 (+)
G43402 NA non-coding downstream 11692 27010372 ~ 27010651 (+)
G43438 NA non-coding downstream 271348 27270028 ~ 27417787 (+)
G43673 NA non-coding downstream 1391009 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 1739443 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 2151298 29149978 ~ 29151334 (+)
AMCG00013281 NA other upstream 58536 26892596 ~ 26923139 (+)
AMCG00013286 pde6g,LOC102221623,LOC103367935,LOC102781464 other upstream 76712 26897509 ~ 26904963 (+)
G43309 NA other upstream 170060 26808164 ~ 26811615 (+)
G43263 NA other upstream 441626 26524826 ~ 26540049 (+)
AMCG00013265 LOC107672452,LOC107711237,LOC107567237,LOC107670476 other upstream 503131 26427946 ~ 26478544 (+)
G43434 NA other downstream 159622 27158302 ~ 27158721 (+)
AMCG00013298 NA other downstream 386985 27385665 ~ 27415286 (+)
G43476 NA other downstream 590459 27589139 ~ 27590818 (+)
AMCG00013310 NA other downstream 930028 27928708 ~ 27935938 (+)
AMCG00013317 NA other downstream 1008834 28007514 ~ 28072799 (+)

Expression


Co-expression Network