AMCG00013292


Basic Information

Item Value
gene id AMCG00013292
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27145647 ~ 27159340 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013292
ATGCGTAATTGTCTCAACGCGAAGGAGGAGGGAGTATCTTTCTGTTCTGGCTTGAGAGAGAAAGACTTGGGGAAACTACACAAAGCTGCCGTTAGGGGAGATGTTTCCAAGTTAGAAAAACTTTCCAAGAAGCATGATTTAAATCAGGTGGATAAAGAACACAgAACACCCTTGCATCTTGCCAGTGTCTGTGGAAAGGCAAACGTTGTGAACTTCTTGGCAGAAAAGAAGGCAGCGTTAAACCCCTTggataatgaaaacaaaacccctCTTATGAAGGCTGTGCAATGTGAGCAGGAGAGCTGTGTTGTCGCCCTGCTGGAGCACAAAGCCGACCCGAACCTGGCGGACATTGATGGGAACACGGCCCTCCATTTCACTGCCGTCATCCGGTCCGTTTCTCTGGCTAAGCACCTACTGGAACATGGGGCCAACATCAATGCTAAAAATAAGGATGGCTTCACCCCTGCGATGCTGGCTCTTGCAGAAGAACATTTTTTTGTGGCATCATTTCTGCTGGAACAAGGAGCAGACACTGATGAAGAGCATCGAATGAAGACCGGGTCAAAGAAATCTGTCTTCTACCAGATGAGGAAGAGCTGGATTGTAGGCCAAAGAGCAGGATGGAGCGACGATGGACCCAAGAAAAATGTGTCTCCTCCCATGGCCTCCACACCTATCCAAGACTTCAAGAAGaggaagaggaagacgGAGATCCTGAAGCTCTGTCCGCTCCTGGATGTGTTCAAGCAGAATCTGGCACTTCCAGGCCTACAGCATTCCAGAAAAAAGCCGGAGTGCTTCGCACAACATTTGGAGCTTGAACAAGTCAAAGAGATTGAGCAAGTGGACGAAGATGACTCTTCCTGGGACTCTGAGtcTGATTGTGACAGTCCTTCCCCAGTGGAGACCCCAGCACCGGTGCTCAGAGTTTCTGAGAGGGCAGTTGAAGaccTATTGGAAGAACTTGGCTGGAGCGACGCAGATAATTTTGAAgATGAGTCGCCGGTCCCCAAACAACGCCTGGTTTCGGAGGATGAAGCCAGTGACCATGGCGTTGGAGCTGCAGAAGCACTGATTGAGGCTGCGTCTCTGCTGTCCCAGCAGGTCGACAAAGCTGAAGCCAAGGCCAACAGCCTGGAAAATGATACATCCCTTCTCCTGGAGACCACGCGGCGGGAGAGAGATGAGGCCCTCGAACGCCTGAGAGACCTGGAGGCCCAGCTGCAGGCGGAAAAGGAGCAGCGGAGTCAGGCCTCAGTTCAGCACGAGACCATGCTTGCTCAGGTGCGTAGCGAAAACGTGCTCCTGAGGAAAGAGCTGGCCGAGGCTCAAAAGAAGGGCCTGGCCAAGGAGGAGGCTGTGAGCGCCGTCCAGCGACATCCTTCAGCAACGTCCTTCAGCGTCATCCAGGGAGAGACTAGAGCCGACAGCTGTGAGAGCTTCCAGCTGGTGGATGACAGGATCAGGGAGCTGGTCGTCAAAAACATGGGGCTCCAGGAACACATATTCTTGCTGGAGAACCAGAACTCGGCGAGAGATGATAATGTGAGACATCTGGAGCAGGACCTGGCAGACACTCTGAAGAAACTGTCTCTGTGCAAAGCCTCTCTCGAGGTCAGCATGCACACCAGACGTgacctggaggaggagaaactGCACATGAAAACAGAGATGGACAGCATGAACATTAAGTTGCAGGAAACCCAGGAGCAGTACCTTCAGAACAAGCAGCTCATCAGCGACCTGATGGACACTCTCGATAAGACAGAGCACGAGGTCATCTCGTCTTCCTCGGCCTTTGAGAATATCATCCAGCAGCTGGACGAGCACAAGCAGAGGCTTGAAATGGAAAACACCAGGCTGGAGGCTGCTAACAAACAGCAGGCAGAGCGATTGGAGGAGCTTCAGAAAGATGCTCTAAAGTCTGCAGTGAATCACGCCGCCTCTCAGGAAGCCTTGGAGAGGATTAAAGCCACCAATGATGCCGCACTGGAGCAGAGGATCGCAGACCTGGAGAGTGAGCTCAACAGGGTGTCTGGTGCCCAGCCGGGCACACAGGCCAAGATGGAGTGCTACAAAGAGCTCTACACACAAGAGCTCCAGCTCCGCATGTCCTTAGAGGCCAAACTTGCGAGGTCCAATGAGAGGCCAGATGAGGACAACGCCAGGCAGCTCAGTGTGAATAGAAGCCTCTGTCTCAGAAGACGCTTCCTCGGCCCAGCGGGACACAGGCTTTCTCAGTACCCAGTGGAGGCGGAATTACAGGTTAGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013292 True 2277 mRNA 0.53 17 27145647 27159340

Neighbor

gene id symbol gene type direction distance location
AMCG00013280 NA coding downstream 144190 26999574 ~ 27001457 (-)
AMCG00013278 NA coding downstream 238681 26903814 ~ 26906966 (-)
AMCG00013279 NA coding downstream 253229 26888488 ~ 26892418 (-)
AMCG00013276 NA coding downstream 312958 26830584 ~ 26832689 (-)
AMCG00013277 LOC102221885 coding downstream 324670 26813858 ~ 26820977 (-)
AMCG00013294 LOC106589628,LOC102791232,LOC102301473,LOC101472949,LOC100695060,LOC101161443 coding upstream 140487 27299827 ~ 27307855 (-)
AMCG00013293 NA coding upstream 176950 27336290 ~ 27339310 (-)
AMCG00013297 NA coding upstream 339335 27498675 ~ 27508068 (-)
AMCG00013300 NA coding upstream 413575 27572915 ~ 27581176 (-)
AMCG00013303 NA coding upstream 430751 27590091 ~ 27590711 (-)
G43425 NA non-coding downstream 18659 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 86405 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 95805 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 99084 27046361 ~ 27046563 (-)
G43400 NA non-coding downstream 150343 26994372 ~ 26995304 (-)
G43518 NA non-coding upstream 554699 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 806672 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 901504 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 902909 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 1070070 28229410 ~ 28234706 (-)
AMCG00013264 NA other downstream 588323 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 661233 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1353888 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 1367924 25776374 ~ 25777723 (-)
AMCG00013241 NA other downstream 1517395 25588487 ~ 25628252 (-)
AMCG00013295 NA other upstream 113889 27273229 ~ 27293073 (-)
G43473 NA other upstream 409424 27568764 ~ 27569151 (-)
G43594 NA other upstream 908873 28068213 ~ 28072787 (-)
G43684 NA other upstream 1307972 28467312 ~ 28467906 (-)
G43869 NA other upstream 2094056 29253396 ~ 29254316 (-)

Expression


Co-expression Network