AMCG00013295


Basic Information

Item Value
gene id AMCG00013295
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27273229 ~ 27293073 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013295
ATGGAATATAGCCTGCTTTGTCACTCCCTGTATGCGATTTCATTCAGCCCGGTGAAAAAGAAACTCTTGCTGCTGTGCATCATGCTCCTGCTCTGGGTGTACATGTTATATTCCTGCGTGGGCTACTGCTCCACCATGCCAAGCGTGATGGTGGACTCTTACCGGGGAAAGGAGACTCAGACCGCCGGCAGACGGACGGAGCGCGGCGGGACAGACCTTATGTCCAAGCTGCTCTCCAGACCCCAAGCCTGGGTGGACCTGGAGGCTGATTACGACGAGCCACCGGTCAGGACGGCGTCCAGAGACTTGCTGAATGATGAGCTGGACTCGGACCGAGCGGAGGACTGGGAGCAGCGGTCTCCCGAGCCCAGCGTCCTGTCCAGTTTCTCCAACGGCTCCGGGAGCAAGAAGCTGCCCCAGGCCATCATCATCGGGGTGAAGAAGGGAGGCACCCGCGCCCTGCTCGAGTTCCTCCGGGTGCATCCCGACATCAGGGCCGTGGGAGCCGAGCCGCACTTCTTCGACAGGAACTACGACAACGGGCTGGACTGGTACAGGTAA
>TU54172
GGGCGCTCGCAGAAGCACCCGGGATGCGCGAGCGGAGGCAGCGTTGTCGCGCGCCACTTTGCACGGTAAAGCAGCCTCTGGAAACCGGGCGAGCATGTCACCAAACCGGCCCCCTCAAGCATGCTGTCTGTTGTAGAGTAGCTCTGTGGTTTTTTTGCATGCGTTATCTGTGCTGGAGGCGTATTTATTAACGCGAGGATTATCTTAAAAAAGTAAGAAGTGCTACCTGGAATGAAAAACTTTGCCAATATGCCTCTCTGGATTATGGTTGCCCCCCGCCAGGCTTATGGAATATAGCCTGCTTTGTCACTCCCTGTATGCGATTTCATTCAGCCCGGTGAAAAAGAAACTCTTGCTGCTGTGCATCATGCTCCTGCTCTGGGTGTACATGTTATATTCCTGCGTGGGCTACTGCTCCACCATGCCAAGCGTGATGGTGGACTCTTACCGGGGAAAGGAGACTCAGACCGCCGGCAGACGGACGGAGCGCGGCGGGACAGACCTTATGTCCAAGCTGCTCTCCAGACCCCAAGCCTGGGTGGACCTGGAGGCTGATTACGACGAGCCACCGGTCAGGACGGCGTCCAGAGACTTGCTGAATGATGAGCTGGACTCGGACCGAGCGGAGGACTGGGAGCAGCGGTCTCCCGAGCCCAGCGTCCTGTCCAGTTTCTCCAACGGCTCCGGGAGCAAGAAGCTGCCCCAGGCCATCATCATCGGGGTGAAGAAGGGAGGCACCCGCGCCCTGCTCGAGTTCCTCCGGGTGCATCCCGACATCAGGGCCGTGGGAGCCGAGCCGCACTTCTTCGACAGGAACTACGACAACGGGCTGGACTGGTACAGGGACCTGATGCCCAAGACCCTGGAGGGC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013295 False 561 mRNA 0.60 1 27292227 27292787
TU54172 True 871 TUCP 0.58 2 27273229 27293073

Neighbor

gene id symbol gene type direction distance location
AMCG00013292 NA coding downstream 113889 27145647 ~ 27159340 (-)
AMCG00013280 NA coding downstream 271772 26999574 ~ 27001457 (-)
AMCG00013278 NA coding downstream 366263 26903814 ~ 26906966 (-)
AMCG00013279 NA coding downstream 380811 26888488 ~ 26892418 (-)
AMCG00013276 NA coding downstream 440540 26830584 ~ 26832689 (-)
AMCG00013294 LOC106589628,LOC102791232,LOC102301473,LOC101472949,LOC100695060,LOC101161443 coding upstream 6754 27299827 ~ 27307855 (-)
AMCG00013293 NA coding upstream 43217 27336290 ~ 27339310 (-)
AMCG00013297 NA coding upstream 205602 27498675 ~ 27508068 (-)
AMCG00013300 NA coding upstream 279842 27572915 ~ 27581176 (-)
AMCG00013303 NA coding upstream 297018 27590091 ~ 27590711 (-)
G43435 NA non-coding downstream 114500 27158301 ~ 27158729 (-)
G43425 NA non-coding downstream 146241 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 213987 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 223387 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 226666 27046361 ~ 27046563 (-)
G43518 NA non-coding upstream 420966 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 672939 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 767771 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 769176 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 936337 28229410 ~ 28234706 (-)
AMCG00013264 NA other downstream 715905 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 788815 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1481470 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 1495506 25776374 ~ 25777723 (-)
AMCG00013241 NA other downstream 1644977 25588487 ~ 25628252 (-)
G43473 NA other upstream 275691 27568764 ~ 27569151 (-)
G43594 NA other upstream 775140 28068213 ~ 28072787 (-)
G43684 NA other upstream 1174239 28467312 ~ 28467906 (-)
G43869 NA other upstream 1960323 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 2633310 29926383 ~ 30028230 (-)

Expression


Co-expression Network