AMCG00013297


Basic Information

Item Value
gene id AMCG00013297
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27498675 ~ 27508068 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013297
ATGAAGCCCAGTGAGCAGAGGCAGACGTGTGAGTTCAGGCTGGACCGGGCGCAGGATCTGACgtgcggcggcggcggcggcggggaTGCTGCCGCGGTGAGCATCTGCGGACGCTGCCAGTCGTGCCACTGCCGTGCCAGGCTGGCCGCCTCCTCCCGCTGGTTCCTCCGCGCCGGGGACGCCTGCAAGAGGAGATTCGTGACCGGCCTCATCATGCGCTGCCACAGCCCGGACCTGCTGGAGAAAACCCGGCACGTCCTGCGGGCCACCCTGGCCAAGGACTTCACCTACTCGCGCTCCCGGCCGCAGCCCAGCCTGCCGGGGGACTCGGGTACCTGGGGCGGCGACCGGGCGCTGGACCCGGGGCTGCTGCGGAGGGAGATGCTGGACACCTGGGACTGGTTCGGCCGCAGTCCATACTGGACCAAAGCCAACTACCTGCTGGGGCTGCTGGCTCTGTGCAGTGCGCAGCTGCTCCATGTAGTCGGCAATCTGGTGCGAGTCCTGATCATCAGACACAAAAGGCATTCCCTGCGCAGCCAAACTACCGTCCTGGACGACGTGGAAGACGATTCCTCCTCTATCCCAGAATCCCATTATTCCTTCAGGTCGGAGGACCGTCCGGGGCTGGAGCTGCTGATGCAGGCCAGTTCCAGCTATGGGCACATTACCATGGAGATGGGTCCCAGTGGCTGGGGCCTGGAATCCATCGATGTCCTTGGGGAAACGGACCTGATCGCAGAATCCACTGAGGACCGGCCGGCACAGGAGGGCCCCTGGGCCACAGAGGAGCCTGAGGCGCTCAGTGACAGCGTTGCTGCGGGGGCCGGTTGGGAAAGCGAGAGCGAGTCTGTGTCCTCCGAAGACCCGGCGCTCTCGGTCATCCCCAGCTCCTCCCGGTCCCTGTCTGGGGTCAGCCGCTACAGGGACTTCGTTCGCCGGCTCCCTGTTCACCTGGCCAAGTGCATCCTGGGGCTCCTGGATAAGACCTCCCTGGTGAACTGTCTCTGCGTGTCTCGGCACTGGCGCTATCTAGCAGAGGAGATACAGAAGGAAGCACTGGTCCGTAGGAATGTGGAGAATCAAGCCATGATCCTCCAGGGCACTTCATCATCAGGAGTGAATCCTGTTTATGCCAAAATCCGGGATGTCCTTGTACCACTGAcacaagaggaaaaacaaaacatacctTTTGAAAACCTTGTCCTTTATCTTTTGTTCTTGCAGGACAAGGGCTTGGAGGCAGCATATTCTGGCACTAAAACCAAGTGCATCCAAATGGAAGAAAGAAATGTTTACTGTGGAACGTACAACATCCTGGTACTGAACGAACATGAGGATCCAAGCAGGGTGGTGCATTTCAATGGTGGCAAACTAGTGGCCATCGGCTCCAAGGACCGACATGTACGCTTACTGGACATGGCGAACGTGAGGGAAGTTCCTCCGCTGATTCACGGCCACGCCGGCAGCATCAGGGCGGTGCTGTTGTGCGAGGAAAGAGGTTTTGTGATCAGCGCGAGCTATGATCTGAGCATCAGATGCTGGAATCTGAAAACAGGGGTGTGTATGAAGATATTTCGGGGCCACTTGGGGACAATAAATTGCCTCGACTTACATGGGAACAGACTGGTTTCAGGGGCCAAGGACTGCAAAGTGAAAGTGTGGAACGTACTGACGGGGAAGAGTTTCTCGAAGCTGAAGTTCAAGCACCAGGACCCCGTCATGTGTGTGAAGATTGACAAGAGCTGTGTGGTCAGCAGCTGCCGGAGGGGCCTCATCAAAGTCTGGCACATCGAGAGCGGCTCGCTCCTGAAGATGGTGGAGGGGCACCGGGGCGCGGTCAAGTGCCTGTTCTTTGATCAGTGGCACATCCTGTCAGGAGGGGCAGACGGCTACGTCATGGCCTGGAGCACAAGCAGAGACTTCCAGAGGTGCCTGATGGCGTTCAGGCACCCAAAGGAGGTGCACTGCTTGGCCTTCCTGTACCTGCGGGTGGTGAGCGGCTGTGCGGACGGCAAGATACGCATCTTCGACTTCCTGACTGGCGACTGCCTAAGAGTGATCAAGGCCAACAGCAAGCAAAaccctgttctctctctgcacaTCCACAAAAACAGCATTGTGATGAACACCAAGGCCAGCATCCTGCTCTTCCAGTTCTCGGAGGTGAAGTGGGACTACTCGATACCTGCTGAGAGAGAGGCTGAGGCAGGCGGGGAGAGATGGTCCCGGGGTCCGGCGCTCAGTAAGCACCCCTACCCCTATGTGCGAGCCCAACGAATGAGGCGAGTCGGCTCCAGCAACAGGAAAATCTTCCACCCCCAGGGCCCGGACGGCGAGGGCCATGGGGAGGGCCTCTCCCACCACGCAGGAAGCCTGTCGGCACAGAATATGCACCGAGCACAGAGTGAGACACTCACCTCGCCGCCCCGGTCACACAGATGTGCCCAGCAGGCGTCTCTGAGACCGGCCACGTGGGGCGAGTTTGTGAGCTACCGACGCAGCACGGCCTACATTGACCTGCAGCCGGAGTTCATGGCCAAGCCCCCCTCCGCTCTGGAGCCAGGGAGGCCAGTCAGCGTGAAGGACTCGGGACGGGGGAGTCCCAGCACTCGGGTGTCTCTAGCCAGGAGTGAGCTCTTGGTCCTGGAGCGAGTGAGGAAGAGGGGCCCACACCACCCTGTGAGTCCTGAGCACCTCCTGCTGACTGTCAACATGGCTCACCTGTCCCACCATTCGGACGAGACCAGCAAAAACCTGGGCCGCAACGCCCACGTCAGAGATGCCTGGGCCTCCCCGGCGTCCCCTGAGCCGGCAGAGAAGAACACGGAGGCCAAGATGGTTTCGAAGCCCTCGCAGCCACAACCCCAAGACCGCCTGACTTCACCGGTGGGCCTCCAGGAAGTGGCGAAGATCTACAGTCCACTGGTTACCAGGACGCTCCAGCTGAACCTCCGGCACTCTCTCCACCGGCACAGTGTCAGGTCCAGCATTCCCACACCGGTGCTGGTGCGACCCCGGACGGGCTCCATGGATCCCCAGGAACCCAAGCCCCGCACGAAGAGGCCGCAGACCTGGTGCGGCACTGGTCATCGCAAGGTGGGCAACTTCACCACCACGGCCGAGGTGGACATCCCAGTGCCACAGCGGATGCTCATGAACGTCCCATGCCGAAGCCCCAAGAGACACGTCAGGTTCGAACAGCCGCTCTCGGTGCCCGGGTCCAACACGTACCACCCTGTGGACCCCTACAGGGAGTACAGCGCATTCAGGCTGCTCACCATCACGCAGacgaaggagctggagcagagcCAAGACCGGCGGTACGACGCCACTCAGTCGAAGAGGCTCCAAGACCGAGACAAGCAGGGCAAGAGGGTCTGGCTCATGAAGGTCAAGGGGTTACCCATCACGGACTTCATCAAGGAGGGCCAAGTGTACGCACCCGAGCTGGGCCACGATGCCTATATCTGA

Function

GO: NA

KEGG:

id description
K10266 FBXW10; F-box and WD-40 domain protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013297 True 3474 mRNA 0.60 14 27498675 27508068

Neighbor

gene id symbol gene type direction distance location
AMCG00013293 NA coding downstream 159365 27336290 ~ 27339310 (-)
AMCG00013294 LOC106589628,LOC102791232,LOC102301473,LOC101472949,LOC100695060,LOC101161443 coding downstream 190820 27299827 ~ 27307855 (-)
AMCG00013292 NA coding downstream 339335 27145647 ~ 27159340 (-)
AMCG00013280 NA coding downstream 497218 26999574 ~ 27001457 (-)
AMCG00013278 NA coding downstream 591709 26903814 ~ 26906966 (-)
AMCG00013300 NA coding upstream 64847 27572915 ~ 27581176 (-)
AMCG00013303 NA coding upstream 82023 27590091 ~ 27590711 (-)
AMCG00013302 myh10,LOC108442176,LOC108272528,LOC107659961 coding upstream 110705 27618773 ~ 27651553 (-)
AMCG00013301 myh10,LOC108272528,LOC107551888 coding upstream 164310 27672378 ~ 27680500 (-)
AMCG00013304 NA coding upstream 179797 27687865 ~ 27707372 (-)
G43435 NA non-coding downstream 339946 27158301 ~ 27158729 (-)
G43425 NA non-coding downstream 371687 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 439433 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 448833 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 452112 27046361 ~ 27046563 (-)
G43518 NA non-coding upstream 205971 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 457944 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 552776 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 554181 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 721342 28229410 ~ 28234706 (-)
AMCG00013295 NA other downstream 205602 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 941351 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 1014261 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1706916 25786143 ~ 25791759 (-)
AMCG00013245 NA other downstream 1720952 25776374 ~ 25777723 (-)
G43473 NA other upstream 60696 27568764 ~ 27569151 (-)
G43594 NA other upstream 560145 28068213 ~ 28072787 (-)
G43684 NA other upstream 959244 28467312 ~ 28467906 (-)
G43869 NA other upstream 1745328 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 2418315 29926383 ~ 30028230 (-)

Expression


Co-expression Network