AMCG00013301 (myh10,LOC108272528,LOC107551888)


Basic Information

Item Value
gene id AMCG00013301
gene name myh10,LOC108272528,LOC107551888
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27672378 ~ 27680500 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013301
ATGAAATgtGGCCTGTGTGTTTTCTACCAACTGGAGATGGCACAGCGGAGTGGGCAGGAGGACCCCGAGCGGTACCTGTTCGTGGACCGGGCGGTGGTCTACAACCCGGCCACACAGGCAGACTGGACGGCCAAGAAACTGGTGTGGGTGCCGTCGGAGCGCCATGGCTTCGAGGCGGCCAGCATCCGCGAGGAGCGTGGCGACGAGGTGGTGGTGGAGCTGGCGGAGAACGGCAAGAAGGCCATGGTAAACAAGGATGACATCCAGAAGATGAACCCACCCAAGTTCTCCAAGGTGGAGGACATGGCCGAGCTCACCTGTCTCAACGAGGCCTCTGTGCTGCACAACCTGAAGGACCGCTACTACTCTGGGCTGATATACACGTATTCTGGACTATTCTGCGTGGTCATAAATCCCTACAAGAACCTCCCCATTTACTCTGAGAATATTATCGAGATGTACCGAGGGAAAAAGAGGCATGAGATGCCACCACATATCTACGCCATCTCCGAATCCGCCTACAGATGCATGCTTCAAGGTAAGACCATTGATTCCCCGCTGCTGTATCTGGGCTGTCCTGTATATACCCTTTGTACAGAGGAATTGAATTGGGGATACAAGCCTAAAACTTGA

Function

symbol description
myh10 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within actin filament bundle distribution; midbrain-hindbrain boundary morphogenesis; and regulation of cell shape. Predicted to be part of myosin complex. Is expressed in several structures, including nervous system; neural tube; paraxial mesoderm; swim bladder bud; and tail bud. Orthologous to human MYH10 (myosin heavy chain 10).

NR:

description
PREDICTED: myosin-10 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013301 True 633 mRNA 0.54 3 27672378 27680500

Neighbor

gene id symbol gene type direction distance location
AMCG00013302 myh10,LOC108442176,LOC108272528,LOC107659961 coding downstream 20825 27618773 ~ 27651553 (-)
AMCG00013303 NA coding downstream 81667 27590091 ~ 27590711 (-)
AMCG00013300 NA coding downstream 91202 27572915 ~ 27581176 (-)
AMCG00013297 NA coding downstream 164310 27498675 ~ 27508068 (-)
AMCG00013293 NA coding downstream 333068 27336290 ~ 27339310 (-)
AMCG00013304 NA coding upstream 7365 27687865 ~ 27707372 (-)
AMCG00013309 NA coding upstream 63538 27744038 ~ 27745915 (-)
AMCG00013305 NA coding upstream 69132 27749632 ~ 27767228 (-)
AMCG00013306 NA coding upstream 93763 27774263 ~ 27788468 (-)
AMCG00013314 NA coding upstream 211838 27892338 ~ 27900889 (-)
G43435 NA non-coding downstream 513649 27158301 ~ 27158729 (-)
G43425 NA non-coding downstream 545390 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 613136 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 622536 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 625815 27046361 ~ 27046563 (-)
G43518 NA non-coding upstream 33539 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 285512 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 380344 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 381749 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 548910 28229410 ~ 28234706 (-)
G43473 NA other downstream 103227 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 379305 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1115054 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 1187964 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1880619 25786143 ~ 25791759 (-)
G43594 NA other upstream 387713 28068213 ~ 28072787 (-)
G43684 NA other upstream 786812 28467312 ~ 28467906 (-)
G43869 NA other upstream 1572896 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 2245883 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 2359705 30040205 ~ 30061634 (-)

Expression


Co-expression Network