AMCG00013303


Basic Information

Item Value
gene id AMCG00013303
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27590091 ~ 27590711 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013303
ATGCTCTTGGACGGAGACGTCAGCATGTCTGCAGGCGAGAGCCAGTCTCCCCGAGAGGGGTTGAACTCTGATGAGTGTCCCGTGTGCTATGAGAGCCTCCAGACCTCCAAGAGGAAACTGAGCTGCGGACACGTCTTCTGCCACGACTGCCTGGCCAAGACACTGTCCAGCGCCAACAAAGATGGGACCATCACCCGAGAGAGCATCAACTGCCCCATGTGCAGGCACCTGACTTTTCTCATCAAACAGCCCTTGCACACCTGCACCCAGGACGAGCAGACTCTGCAGGTCCATGTCTGTCGTCCGTCCACATCAGATCCGTCCTGTGTCGTCCAACCACCAGCCTCGCATCACCTCGCCCAGTTTTTCGGACCGGCCTCTTTGGACAGCTCCGTCTCCAGACCTACCATCACAGctgattttcagatttttacCATTAGTGGCCAAGGTCGACCCATGGGGGCTGAGGACGTGTTCACAGTGGGCGGGCAGGCTGTCGTACTAGGACGCAGAAGAGGAGCGAGGTGCTGCCCGGTTGCCCGCTCTGTGGTTGGCGTGGTTATTTTGGCACTGGTGATGGCAGCAATAATTGTCGCAATACCTTGGATAGAACCGCGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013303 True 621 mRNA 0.57 1 27590091 27590711

Neighbor

gene id symbol gene type direction distance location
AMCG00013300 NA coding downstream 8915 27572915 ~ 27581176 (-)
AMCG00013297 NA coding downstream 82023 27498675 ~ 27508068 (-)
AMCG00013293 NA coding downstream 250781 27336290 ~ 27339310 (-)
AMCG00013294 LOC106589628,LOC102791232,LOC102301473,LOC101472949,LOC100695060,LOC101161443 coding downstream 282236 27299827 ~ 27307855 (-)
AMCG00013292 NA coding downstream 430751 27145647 ~ 27159340 (-)
AMCG00013302 myh10,LOC108442176,LOC108272528,LOC107659961 coding upstream 28062 27618773 ~ 27651553 (-)
AMCG00013301 myh10,LOC108272528,LOC107551888 coding upstream 81667 27672378 ~ 27680500 (-)
AMCG00013304 NA coding upstream 97154 27687865 ~ 27707372 (-)
AMCG00013309 NA coding upstream 153327 27744038 ~ 27745915 (-)
AMCG00013305 NA coding upstream 158921 27749632 ~ 27767228 (-)
G43435 NA non-coding downstream 431362 27158301 ~ 27158729 (-)
G43425 NA non-coding downstream 463103 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 530849 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 540249 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 543528 27046361 ~ 27046563 (-)
G43518 NA non-coding upstream 123328 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 375301 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 470133 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 471538 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 638699 28229410 ~ 28234706 (-)
G43473 NA other downstream 20940 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 297018 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1032767 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 1105677 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1798332 25786143 ~ 25791759 (-)
G43594 NA other upstream 477502 28068213 ~ 28072787 (-)
G43684 NA other upstream 876601 28467312 ~ 28467906 (-)
G43869 NA other upstream 1662685 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 2335672 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 2449494 30040205 ~ 30061634 (-)

Expression


Co-expression Network