AMCG00013304


Basic Information

Item Value
gene id AMCG00013304
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 27687865 ~ 27707372 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013304
ATGGTGTTTCCCAGATGTCGTGTCCAGAGCGGCGAGGAATCCAGAAGGCACTCGATGGAGACCACTGCGCTGGGGGGGGGAGCGATGCAGAGGCGGTCAGGAGGCCTTTCAAGTTGCTTCCCGTCTCCGCTGACATTTCCCGAGGTTTGCCAAGCAAGGGTGACACTGGGGGGGAGGTTCCTATTCCTGTTCTCAAGGAGGCGCTACCCTTCAGTTGACCAGCAGGACTGCAGCTCCCAGTCTGAAGCCCTTCAGCAATTAGTTGCAGCTGTCAGTGGGGACAGTCCGGAGCAGGAGGACGCTGCGGACCCTCAGGCTGATGGGACACAGCCGCCTCTCTCTAGCCCTGAAGCGGAGCGGCCTCCCTCCTGCACGGCCCCGGATCCCAATACAAAGGGCGATGAGGTGACCCAGGAGGACCCGAGCGACGGTGATTTGACCAGGCACAGCTTTGAACTTCACAAGGTCGTTGTGGACGTCACGAGCTGCGTCCTGTGGCACCTGTGCCCCCAGAGGGGTCTGCCTGTGAAGCTGATGAACCGTCTTCTGAGTGAAGTCCTGGAACTCCTCCACAGCTCACCAGACTGTACAGATCTCTTAGGGTTTCTGAGAGACAGCCAAAACATCTGCTCTCTCAGCGACCCAGTGTACGACTGTGTGTCCCCCGTGCTACGGGAGCTGCAGGAGCCTCCGCCTCTGAACAACTTGAACGCCCTGGTCCAGAGCCCGGAACTGCAGCGGAGAGTGGTCAGTGTGGTGGCAAAGAACCTGCTGGGCTTGACCCCTAGCAAGGCGGAGCCTGTGTGTGCTGATGACAGCTGCACTGACGAACAGAGAGGGGCCTGTCTGGGGGCCAGGGAACGTCAGTCCAGCACCAGGACGACACCCATCATCGTCAGGGAGGCACAGCCGGACAGGAGGGTGTCTCTGCCCATGGCGCCAGAGGCACTGAGTGCCAGCCTGCCACCTCACTGCCCCTCCGTCACACCTGAACGGTTGGCCAGCGCCAAGATGTCACCCATGTCACCCACCGTTGTCAGGGAGGCTCAGCTGGAAAGGAGGGCATCTCTACCTGAGGCACTGGAGATGCTGAGCACCAGCCTGCCACCGCACAGCCCCTCCGTCACACCTGAGCGGCCTGCCAGCGCCAGGACTACACCCACCATCGTGAGGGAGGCAGAGCCGGACAGGAGGGTGTCTCTGCCCATAGTGCCAGAGGCACTGAGTGCCAGGCTGCCACTGAAGCCCCACTCGGTCATGCCTGCCGAGCCCCAGGAGCCGAGCGCTGAAGCCCTGCAGCATTTCATTGCAACTGTCAGAGAGGACAATCTGGGGCAGGaggacactgcggccccccaggctGACGGGACACAGatgcctctctcctcctctaCGGACCCGGCTTTGCCCAGATACCTGTCGTACCTGCGGTACCTGGAAGCCCTGCTCAATGGTGAAGAGGACAGGCGCAGCTCTGATCCTCGTGACGTAATCTTGGATGTCCTGAGCTGCCTGCTGTGGCATCTTTGTCCCTTGCAGTGTGTGCGAGACAAAGAGGAGCTCCGCAAGCGGGCAGAGCTGGAGAACCAGCTCCTGGAACGGGTGCTGAAGTTCGTCAGCCTGCCGGACAGGACAACGACCGACCTGTTGAGGGAGGAGCCGGAGTCACGCTCTCTCACTGACCCCGTGAACGACATCTTGTCCTCTGTGCTCCTGGAGCTGCAGGAGACTCCGCCCGTGGACAACTACATGGGTACCCTGGACCAGAGCCCCGAACTGCAGCGGATGGTGGTCAGTGTGGTGGCCAGGAACCTGCCATGGGGGGGCCCTGTAGCCAGGGAGTGCGTCTCTGCCTGGGGACCGGGAGAAGCTGAGCGGCAGCCACCCACTGCGGACCTCCCACCACAGCCCGGAGACGCAGGCCAGGCCAGGGGGGAGGTCAAACTGTCCTTGTGGAAGAGATTCCGCAGGTTCTGCTCGCAGTTTTCACCACGTCTCTCCCAGCTGTGCGTGGTGAGGGTGACGCCCATGTGAACCCCCAGCCACCGACTGTGCTCCCGTCCAGAAACTAGAAATGACATTCACACGAGAGGCAGTGTGGAGGCGCTGCCGATCCAGCTTGTGAGGATCCATCGGAGGGGAGCAGCCAAGGACGGATAGCCTGCCTGGCTGGCAGGAACACAACCAGTGAGGAGCTGGCGAGCGAGAACCCAGCCATCATTACTCGGGGAGGTATTGCCGgatgagaggagagggagaagacaACAGTTTTGGGGAATCTTTCAATGAAGAACCGTTTCAAACAATGAACAATGTCTGTAGTCTGATTTCTTTTCCATTCGTTAaaaatgcaagtctcctgtatCCCTTGTTCCTCTCTCTGCATTCCCTTCTTCCAAACCTGATGCAACCAGCTTGGATCGTGGCCGTGGGTTGGGGATTGGCCATGGGGAACGTGGGGATTGGCTCAGAGTCCAGCGAAATCAAGCACACATGCaagcaataatacaataattgatCAGTCAAGTGAAACCCAACCTGTACAGTGCAAAGCAAGACCGGATGTGAAAGGTAATGCATAGATTACCAACAcgaataatgaattaaaataaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013304 True 2614 mRNA 0.59 7 27687865 27707372

Neighbor

gene id symbol gene type direction distance location
AMCG00013301 myh10,LOC108272528,LOC107551888 coding downstream 7365 27672378 ~ 27680500 (-)
AMCG00013302 myh10,LOC108442176,LOC108272528,LOC107659961 coding downstream 36312 27618773 ~ 27651553 (-)
AMCG00013303 NA coding downstream 97154 27590091 ~ 27590711 (-)
AMCG00013300 NA coding downstream 106689 27572915 ~ 27581176 (-)
AMCG00013297 NA coding downstream 179797 27498675 ~ 27508068 (-)
AMCG00013309 NA coding upstream 36666 27744038 ~ 27745915 (-)
AMCG00013305 NA coding upstream 42260 27749632 ~ 27767228 (-)
AMCG00013306 NA coding upstream 66891 27774263 ~ 27788468 (-)
AMCG00013314 NA coding upstream 184966 27892338 ~ 27900889 (-)
AMCG00013313 stx8 coding upstream 210550 27917922 ~ 27927327 (-)
G43435 NA non-coding downstream 529136 27158301 ~ 27158729 (-)
G43425 NA non-coding downstream 560877 27126780 ~ 27126988 (-)
G43417 NA non-coding downstream 628623 27055552 ~ 27059242 (-)
G43412 NA non-coding downstream 638023 27049568 ~ 27049842 (-)
G43410 NA non-coding downstream 641302 27046361 ~ 27046563 (-)
G43518 NA non-coding upstream 6667 27714039 ~ 27717043 (-)
G43590 NA non-coding upstream 258640 27966012 ~ 27966233 (-)
G43592 LOC105901958,LOC107704008 non-coding upstream 353472 28060844 ~ 28061169 (-)
G43593 NA non-coding upstream 354877 28062249 ~ 28062453 (-)
G43626 NA non-coding upstream 522038 28229410 ~ 28234706 (-)
G43473 NA other downstream 118714 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 394792 27273229 ~ 27293073 (-)
AMCG00013264 NA other downstream 1130541 26553549 ~ 26557324 (-)
AMCG00013258 NA other downstream 1203451 26479611 ~ 26484414 (-)
AMCG00013246 NA other downstream 1896106 25786143 ~ 25791759 (-)
G43594 NA other upstream 360841 28068213 ~ 28072787 (-)
G43684 NA other upstream 759940 28467312 ~ 28467906 (-)
G43869 NA other upstream 1546024 29253396 ~ 29254316 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other upstream 2219011 29926383 ~ 30028230 (-)
AMCG00013384 NA other upstream 2332833 30040205 ~ 30061634 (-)

Expression


Co-expression Network