AMCG00013324


Basic Information

Item Value
gene id AMCG00013324
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28227569 ~ 28234482 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013324
GGGGATTAAACGATAAAAGCGACGCTCCCTGGCGGAGCGGGTTCAATTCAGTCGGAGCCGGGCGGAGCAGTAGAGGGAGTGAGCGCcgcacaaaattaaaataaaaggatattacaaaacatttattatcaACGGACATTATCTAATAAGGAGTCTCGACATGACGACGACGACCACTTTCCAAGGGATGGACCCGGGTTCAAAAAACAGTTccagGGTGCTGCGGCCCCCGGGCGGAGGCTCCAACATCTCCTTTGGCAATGGGGACGAGGAAGGCAAAGCCCAGAACACCCGCAAGAACAGAACCGCCTCCAACATCTTCGCGGAGCCGGAGGACCCCCACGCTCACAGGAGGAACAATCCACCGGGTGGAAAGCCCTCTGGTATCTTTAGTGGCGAGCCCTCCGCTCCCCTCAGACGATGTCACACCCAGCCTGCTGTGCAGTCCAACAGCGTCTCCGAGGAAGCAAAAACCGGAGATGGTGAAATGGAAAGGGCAATTATTGAAAATTCGGAGGAGGTCGAAATCATCCCGGAACAGAAGGAGGAGGCGCCACAGCCCTCGGCACCCACAGTACCTGCTGCCGCGCCAGGCGGGCGGAGAAACCCCCCTGGGGGAAAGTCCAGTCTCATCCTGGGCTGAGCTTGCTTTCTTTGAACTCTttcatgcttatttttttatccccccTTATCTGTGTGAGCCATGGAACTTCAGTCCAGTTTCTCAttgttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013324 True 735 mRNA 0.54 5 28227569 28234482

Neighbor

gene id symbol gene type direction distance location
AMCG00013320 sumo2,sumo2b,LOC106606624,LOC108411789,LOC106564670 coding upstream 3133 28219066 ~ 28224436 (+)
AMCG00013322 NA coding upstream 18974 28199809 ~ 28208595 (+)
AMCG00013321 mif4gd,mif4gdb,LOC106606581,LOC107553652,LOC106601806,LOC107570710 coding upstream 30626 28190435 ~ 28196943 (+)
AMCG00013315 NA coding upstream 47768 28172751 ~ 28179801 (+)
AMCG00013316 grb2,grb2b,LOC105013161,LOC106523871,LOC107719324 coding upstream 60793 28161330 ~ 28166776 (+)
AMCG00013323 NA coding downstream 2301 28236783 ~ 28254407 (+)
AMCG00013328 NA coding downstream 68871 28303353 ~ 28305608 (+)
AMCG00013327 NA coding downstream 88427 28322909 ~ 28343487 (+)
AMCG00013329 tnrc6c,LOC107724432 coding downstream 229880 28464362 ~ 28483978 (+)
AMCG00013330 LOC108424797 coding downstream 331616 28566098 ~ 28582254 (+)
G43438 NA non-coding upstream 809782 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1216918 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1297316 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1442008 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 2382975 25807419 ~ 25844594 (+)
G43673 NA non-coding downstream 155207 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 503641 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 915496 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 922217 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 942569 29177051 ~ 29178266 (+)
AMCG00013317 NA other upstream 154770 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 291631 27928708 ~ 27935938 (+)
G43476 NA other upstream 636751 27589139 ~ 27590818 (+)
AMCG00013298 NA other upstream 812283 27385665 ~ 27415286 (+)
G43434 NA other upstream 1068848 27158302 ~ 27158721 (+)
G43682 NA other downstream 249791 28484273 ~ 28488783 (+)
AMCG00013336 NA other downstream 442060 28676542 ~ 28686138 (+)
G43802 NA other downstream 869807 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 1406141 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1651280 29885762 ~ 29928697 (+)

Expression


Co-expression Network