AMCG00013328


Basic Information

Item Value
gene id AMCG00013328
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28303353 ~ 28305608 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013328
ATGGGGACGGGCGGTGATGAGAGAGGGTCGGGCTGGGAGCCCCTCACAGTCCTGCTGGAGAGTCACTCGTGTTGGCAGCGCTCTGTGGATGTGATCCTGATGCTGGACCGCGCCAGGAATCAGCTCAGCATCTTAAGGACGCCTAACCCTCACCTCCGGTCGGCTGTGTCTTCCTCTACCCAGCGCTTCCAGGAGCTGGGCGCCCGCAACTCGGACTTCTCCCAGAAGGGCTCGGAACTGTCCAACCAACGCTCCCCCAAGACCAGCCTGCGGCGCGTGGAGCTGCCCGGCCCGCGCGCTCCCGAACCTGTGTCCCGGAGGACGGAGATCTCCATCGACATCTCCTCCAAGCAGGTGGACAGCTCCCCCAGTCCTGGCATCTCACGGTTCGGGCTGAAGAGACCTGAGGTCGTGGGGCACAAGCCACCGGAGCTGGCGCACAGACGGGCAGAACTCAACCTCGGCAAGGTGCACGAGCCCCCACCTCTCAGGAAGGTCGAAACGCcttccacctcctcctccgcctcctcctcctcctcttcctccaggaTCCCTGACCCTCCCCAGAGGAAGGCCGAGCTGCCCAGTCACACCACGTCTGTGGAAACTCCACCAAAACGCAGTGAGGCTCCGCTCAGCAAGCCCCCCGAGACAGTGGCTCCGACTAGGGCGTCTGAAAACAACTTCTCAGCGCCTGCCAGTGCCCCGGCCTCCCACTCGGAGCCCAAGACACAGCCCGCTGTCACCGAGGTCTACATCAGGAGCCCTGACGGTGAGTACAGAGGTGGTGTAGCCTCCTCTCCCTGGCTGATACCCCCACTTAGACATCTCCACCGCCTGAGCACTTTGCAGCATTCCTTGTGTTCGTCTGATTGCGATCAGCTCAACAGCATTGACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013328 True 900 mRNA 0.63 2 28303353 28305608

Neighbor

gene id symbol gene type direction distance location
AMCG00013323 NA coding upstream 48946 28236783 ~ 28254407 (+)
AMCG00013324 NA coding upstream 68871 28227569 ~ 28234482 (+)
AMCG00013320 sumo2,sumo2b,LOC106606624,LOC108411789,LOC106564670 coding upstream 78917 28219066 ~ 28224436 (+)
AMCG00013322 NA coding upstream 94758 28199809 ~ 28208595 (+)
AMCG00013321 mif4gd,mif4gdb,LOC106606581,LOC107553652,LOC106601806,LOC107570710 coding upstream 106410 28190435 ~ 28196943 (+)
AMCG00013327 NA coding downstream 17301 28322909 ~ 28343487 (+)
AMCG00013329 tnrc6c,LOC107724432 coding downstream 158754 28464362 ~ 28483978 (+)
AMCG00013330 LOC108424797 coding downstream 260490 28566098 ~ 28582254 (+)
AMCG00013335 NA coding downstream 294295 28599903 ~ 28606883 (+)
AMCG00013334 NA coding downstream 304497 28610105 ~ 28610395 (+)
G43438 NA non-coding upstream 885566 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1292702 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1373100 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1517792 26784953 ~ 26785561 (+)
G43138 NA non-coding upstream 2458759 25807419 ~ 25844594 (+)
G43673 NA non-coding downstream 84081 28389689 ~ 28389960 (+)
G43712 NA non-coding downstream 432515 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 844370 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 851091 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 871443 29177051 ~ 29178266 (+)
AMCG00013317 NA other upstream 230554 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 367415 27928708 ~ 27935938 (+)
G43476 NA other upstream 712535 27589139 ~ 27590818 (+)
AMCG00013298 NA other upstream 888067 27385665 ~ 27415286 (+)
G43434 NA other upstream 1144632 27158302 ~ 27158721 (+)
G43682 NA other downstream 178665 28484273 ~ 28488783 (+)
AMCG00013336 NA other downstream 370934 28676542 ~ 28686138 (+)
G43802 NA other downstream 798681 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 1335015 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1580154 29885762 ~ 29928697 (+)

Expression


Co-expression Network