AMCG00013333


Basic Information

Item Value
gene id AMCG00013333
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28611303 ~ 28623511 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013333
ATGGGCTTTGTATCTGAGGAGCTCAATGACACCGAGAAAGAGAACATTCAGAGGAACAAAGTCAGCAACATGGCGGTCGTCTATGGCAAGGAGGCCAGCATGTGGAAGGCAACTGGCATTTGCTTCCCCTCCAGCCATAGTCTCGCCCACAAGTGCCAGGAACCGAGAGATGGCACCGTGCCATCGCTTACAGAAGATCACCTGATCACTGGAAAGGAGAAGTTCCTGCAGATTCTGCACCGCTACATGGAGATCCACGGCACCGTTTACTACGAGACACAGCGCCCGCCGGAGGTGCCCGCCTTCGTCAAGAACCACGGGCTGCTGCCCCAGCAGGAGCTGCAGCAACTCCTGCGCAAAGCCAAGCTCTTCATTGGCTTTGGTTTCCCATATGAAGGCCCAGCCCCGTTGGAAGCCATAGCCAACGGCTGCATCTTTTTGCAGCCCAAGTTTCGCCCTCCGCACAGCTCCCTCAATCACGAGTTCTTCAGAGGGAAACCCACGTCCAGAGAGGTCTCCTCCCAGCACCCGTACGCAGAGCAGTACATTGGGAAGCCCCACGTCATCACAGTGGACTACAACCACTCCCAGGAGTTCGACGCGGCCATCCACGAGATCATGAGGGCGCGGGTGGAGCCCTACCTGCCATACGAGTACACCTGCGAGGGGATGCTGGAGAGAGTCCATGCCTACATCCAGCATCAGGACTTCTGTGCCCCAGAGGCCCCGTTCACCCCAACAAACGTCTCCAAGTCCTGGCCGGGGAGCAGCTCCAGCCCCTTCATCTCCCTGCCCAATGCCACCGGCCTGGCCTGGGCCTCCAACGTCACCGCGCCGCCCTCCTGGCCGCCCCTGAgcgccctgctgctgctggtgtcGGAGGAGGGAGAGTCCTGCATCGCCAAGTGCCAGAACCATGGCTTGATCTGCGAGCCAGCCTTCTTCCGGTTTGTCAACAACAAGGAGGCCCTGGCCCGGCTGGAGGTGCAGTGTGAGGGCATCGAGTCCGAGATGAACCACGTCTTCCCGGCGTTCTCGGTGGTCCGGCGGGAGTGCGGCCTGCAGAAGGAGCCGCTCCTCTTCAGCTGCGCCGGCTTCAGCAGCAAGTACCGCCGCCTCTGCCCCTGCAGGGACTTCCGCAAAGGCCAGGTGGCGCTGTGCAGGGACTGTTTATGa

Function

GO: NA

KEGG:

id description
ko04721 Synaptic vesicle cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013333 True 1176 mRNA 0.61 8 28611303 28623511

Neighbor

gene id symbol gene type direction distance location
AMCG00013334 NA coding upstream 908 28610105 ~ 28610395 (+)
AMCG00013335 NA coding upstream 4420 28599903 ~ 28606883 (+)
AMCG00013330 LOC108424797 coding upstream 29049 28566098 ~ 28582254 (+)
AMCG00013329 tnrc6c,LOC107724432 coding upstream 127325 28464362 ~ 28483978 (+)
AMCG00013327 NA coding upstream 267816 28322909 ~ 28343487 (+)
AMCG00013337 NA coding downstream 80536 28704047 ~ 28716412 (+)
AMCG00013338 NA coding downstream 104062 28727573 ~ 28733671 (+)
AMCG00013340 NA coding downstream 172235 28795746 ~ 28799306 (+)
AMCG00013341 rptor coding downstream 218241 28841752 ~ 28914840 (+)
AMCG00013342 NA coding downstream 295242 28918753 ~ 28936041 (+)
G43673 NA non-coding upstream 221343 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1193516 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1600652 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1681050 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1825742 26784953 ~ 26785561 (+)
G43712 NA non-coding downstream 114612 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 526467 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 533188 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 553540 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 555587 29179098 ~ 29202721 (+)
G43682 NA other upstream 122520 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 538504 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 675365 27928708 ~ 27935938 (+)
G43476 NA other upstream 1020485 27589139 ~ 27590818 (+)
AMCG00013298 NA other upstream 1196017 27385665 ~ 27415286 (+)
AMCG00013336 NA other downstream 53031 28676542 ~ 28686138 (+)
G43802 NA other downstream 480778 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 1017112 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1262251 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1439869 30063380 ~ 30074748 (+)

Expression


Co-expression Network