AMCG00013334


Basic Information

Item Value
gene id AMCG00013334
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28610105 ~ 28610395 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013334
ATGGCGCTCTCAGCATGTGACTCGGTCTGCCGTCTTTGCCGTCTTAGGTGCCACATCCGAGTGATTGACACCTTCGGCACTGAGCCGGCCTACAACCACGAGGAGTACGCCACCCTGCACGGGTACCGGACCAACTGGGGCTACTGGAACCTCAACACCAAGCAGTACATGACCATGTTCCGTGAGTACAGCCGTTCGGACCTAAGCAGAGTGGCCGTAGCTACGGTTCCTCAGCAGCGAAGCTCTCCACACCGTAGTCATGTGACAAGGTGTCTCATTCTCCGCATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013334 True 291 mRNA 0.57 1 28610105 28610395

Neighbor

gene id symbol gene type direction distance location
AMCG00013335 NA coding upstream 3222 28599903 ~ 28606883 (+)
AMCG00013330 LOC108424797 coding upstream 27851 28566098 ~ 28582254 (+)
AMCG00013329 tnrc6c,LOC107724432 coding upstream 126127 28464362 ~ 28483978 (+)
AMCG00013327 NA coding upstream 266618 28322909 ~ 28343487 (+)
AMCG00013328 NA coding upstream 304497 28303353 ~ 28305608 (+)
AMCG00013333 NA coding downstream 908 28611303 ~ 28623511 (+)
AMCG00013337 NA coding downstream 93652 28704047 ~ 28716412 (+)
AMCG00013338 NA coding downstream 117178 28727573 ~ 28733671 (+)
AMCG00013340 NA coding downstream 185351 28795746 ~ 28799306 (+)
AMCG00013341 rptor coding downstream 231357 28841752 ~ 28914840 (+)
G43673 NA non-coding upstream 220145 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1192318 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1599454 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1679852 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1824544 26784953 ~ 26785561 (+)
G43712 NA non-coding downstream 127728 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 539583 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 546304 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 566656 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 568703 29179098 ~ 29202721 (+)
G43682 NA other upstream 121322 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 537306 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 674167 27928708 ~ 27935938 (+)
G43476 NA other upstream 1019287 27589139 ~ 27590818 (+)
AMCG00013298 NA other upstream 1194819 27385665 ~ 27415286 (+)
AMCG00013336 NA other downstream 66147 28676542 ~ 28686138 (+)
G43802 NA other downstream 493894 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 1030228 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1275367 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1452985 30063380 ~ 30074748 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025855 MGAT5B coding NC_007114.7 CM002887.2 59117136 ~ 59167824 (+)