AMCG00013337


Basic Information

Item Value
gene id AMCG00013337
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 28704047 ~ 28716412 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013337
ATGAAAGAAACAACCTTGAAGAGTTCAAAGAGTTCAGTCCTGTCCCCACCCTGTGTGAAGCGACAGTCACGCAtggcctaCGAGAGGCGGTTCCCCACGTGCCCTCTGATCCCGATGTTCGTGGACAGCGACATAGTCAGCGAATTCAACAGCGAGGACGGCGCCGTGCACATGGTGGAGCGCCGCTGCAAGCTCGATGTGGATGCCCCGCGGCTGCTCAAGAGGatcGCGGGGGTCGATTATGTCTACTTTGTGCAGAAGAACTCCCTGAACCGCAGAGAGAGGACCCTCCAGATCGAGGCACACAACGAGACCTTCTCCAACCGGGTCATCATCAACGAGCTGTGCTGCTACAGCGTTCACCCAGACAATGAGGACTGGACCTGTTTCGAGCAGCTGGCCAGCCTGGACATCAAGTCTTTCTTCGGGTTCGAGAGCACGGTGGAAAAGATCGCCATGAAGCAGTACACCAGCAGTATTAAAAAGGGCAAAGAAATCATCGAGTATTACTTgcgggagctggaggaggagggcgTGACGCACATCCCACGCTGGACTCCTTCGGCTGTGTGTCCCGCCAAGGCCACCGTCACTGCCAGGCCCGAGCTGCCCATCTCCCCCGCCATCAGCATCCCCATCGCCAGCGCCAAGGAAGCCCCTAAAGAGACCCCCAGCCTGCCAGGCAGCCTCACTGAGCCGCTCACCGGCACCCCCGACGACAAACTGGAGGCCGACTACATCGAGCGCTACCTGGGCGACCTGACGCCGCTGCAGGAGAGCTGCCTGATCCGGCTGCGCCAGTGGCTGCAGGAGACGCACAAGGGCAAGATCCCCAAGGACGAGCACATCCTGCGCTTCCTGCGGGCGCGCGACTTCAACATCGACAAGGCGCGCGAGATCCTGTGCCAGTCACTCACCTGGAGGAAGCAGCACCAGGTGGACTATCTTCTGGAGACCTGGACCTCCCCCCAGGTCCTGCAGGACTTCTACACTGGCGGGTGGCACCACCACGACAAAGATGGCCGGCCTCTTTACATCCTGCGGCTGGGACAGATGGACACGAAGGGGTTGGTCCGCGCCCTCGGGGAGGAGTCTCTGCTGCGCCACGTGCTCTCGATAAACGAGGAAGGGCTGCGGCGATGTGAGGAGAACACCAAAGTCTTCGGACGACCGATAAGcTCCTGGACGTGCCTGGTGGACCTGGAGGGGCTGAACATGCGTCACCTGTGGCGTCCGGGCGTGAAGGCACTGCTGCGCATCATTGAGGTCAGCCCGTTCATCGACGACAACACGCGCAAGAAGTTCCTGATCTACGCCGGAAACGACTACCAGGGCCCCGGCGGCCTGGTGGACTACATCGACCGGGAGATCATCCCCGACTTCCTGGGGGGCGAGTGCATgTGTGAGGTTCCAGAAGGGGGGCTGGTCCCCAAGTCTCTGTACCGGACCACCGAGGAGCTGGAGAACGAGGACATCCGCCTGTGGACAGAGACCATCTACCAGAGTGCCAGCGTCTTCAAGGGAGCCCCCCACGAGGAAACTCTCTTTCTACAACAAGATCAACCGTCAGCAGCAGCACCCAGCGTCTCGAAGCATCAGGACGACTACGACACCCCTAATGAAGACAGCGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013337 True 1635 mRNA 0.60 13 28704047 28716412

Neighbor

gene id symbol gene type direction distance location
AMCG00013333 NA coding upstream 80536 28611303 ~ 28623511 (+)
AMCG00013334 NA coding upstream 93652 28610105 ~ 28610395 (+)
AMCG00013335 NA coding upstream 97164 28599903 ~ 28606883 (+)
AMCG00013330 LOC108424797 coding upstream 121793 28566098 ~ 28582254 (+)
AMCG00013329 tnrc6c,LOC107724432 coding upstream 220069 28464362 ~ 28483978 (+)
AMCG00013338 NA coding downstream 11161 28727573 ~ 28733671 (+)
AMCG00013340 NA coding downstream 79334 28795746 ~ 28799306 (+)
AMCG00013341 rptor coding downstream 125340 28841752 ~ 28914840 (+)
AMCG00013342 NA coding downstream 202341 28918753 ~ 28936041 (+)
AMCG00013343 LOC103354899,LOC102794595,LOC101480902 coding downstream 253116 28969528 ~ 28970154 (+)
G43673 NA non-coding upstream 314087 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1286260 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1693396 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 1773794 26872821 ~ 26930253 (+)
G43303 NA non-coding upstream 1918486 26784953 ~ 26785561 (+)
G43712 NA non-coding downstream 21711 28738123 ~ 28738753 (+)
G43810 NA non-coding downstream 433566 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 440287 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 460639 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 462686 29179098 ~ 29202721 (+)
AMCG00013336 NA other upstream 17909 28676542 ~ 28686138 (+)
G43682 NA other upstream 215264 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 631248 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 768109 27928708 ~ 27935938 (+)
G43476 NA other upstream 1113229 27589139 ~ 27590818 (+)
G43802 NA other downstream 387877 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 924211 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 1169350 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1346968 30063380 ~ 30074748 (+)
AMCG00013388 NA other downstream 1367232 30083644 ~ 30090117 (+)

Expression


Co-expression Network