Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013340 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 28795746 ~ 28799306 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013340 | True | 717 | mRNA | 0.65 | 4 | 28795746 | 28799306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013338 | NA | coding | upstream | 62075 | 28727573 ~ 28733671 (+) |
| AMCG00013337 | NA | coding | upstream | 79334 | 28704047 ~ 28716412 (+) |
| AMCG00013333 | NA | coding | upstream | 172235 | 28611303 ~ 28623511 (+) |
| AMCG00013334 | NA | coding | upstream | 185351 | 28610105 ~ 28610395 (+) |
| AMCG00013335 | NA | coding | upstream | 188863 | 28599903 ~ 28606883 (+) |
| AMCG00013341 | rptor | coding | downstream | 42446 | 28841752 ~ 28914840 (+) |
| AMCG00013342 | NA | coding | downstream | 119447 | 28918753 ~ 28936041 (+) |
| AMCG00013343 | LOC103354899,LOC102794595,LOC101480902 | coding | downstream | 170222 | 28969528 ~ 28970154 (+) |
| AMCG00013345 | NA | coding | downstream | 204739 | 29004045 ~ 29011275 (+) |
| AMCG00013346 | NA | coding | downstream | 222701 | 29022007 ~ 29029208 (+) |
| G43712 | NA | non-coding | upstream | 56993 | 28738123 ~ 28738753 (+) |
| G43673 | NA | non-coding | upstream | 405786 | 28389689 ~ 28389960 (+) |
| G43438 | NA | non-coding | upstream | 1377959 | 27270028 ~ 27417787 (+) |
| G43402 | NA | non-coding | upstream | 1785095 | 27010372 ~ 27010651 (+) |
| G43326 | NA | non-coding | upstream | 1865493 | 26872821 ~ 26930253 (+) |
| G43810 | NA | non-coding | downstream | 350672 | 29149978 ~ 29151334 (+) |
| G43799 | NA | non-coding | downstream | 357393 | 29156699 ~ 29158493 (+) |
| G43853 | NA | non-coding | downstream | 377745 | 29177051 ~ 29178266 (+) |
| G43855 | NA | non-coding | downstream | 379792 | 29179098 ~ 29202721 (+) |
| G43895 | NA | non-coding | downstream | 634744 | 29434050 ~ 29446698 (+) |
| AMCG00013336 | NA | other | upstream | 109608 | 28676542 ~ 28686138 (+) |
| G43682 | NA | other | upstream | 306963 | 28484273 ~ 28488783 (+) |
| AMCG00013317 | NA | other | upstream | 722947 | 28007514 ~ 28072799 (+) |
| AMCG00013310 | NA | other | upstream | 859808 | 27928708 ~ 27935938 (+) |
| G43476 | NA | other | upstream | 1204928 | 27589139 ~ 27590818 (+) |
| G43802 | NA | other | downstream | 304983 | 29104289 ~ 29104577 (+) |
| AMCG00013364 | cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 | other | downstream | 841317 | 29640623 ~ 29667051 (+) |
| AMCG00013375 | bptf,LOC105013188,LOC106607015,LOC103359999 | other | downstream | 1086456 | 29885762 ~ 29928697 (+) |
| AMCG00013382 | NA | other | downstream | 1264074 | 30063380 ~ 30074748 (+) |
| AMCG00013388 | NA | other | downstream | 1284338 | 30083644 ~ 30090117 (+) |
