AMCG00013344


Basic Information

Item Value
gene id AMCG00013344
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29033142 ~ 29059640 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013344
CTTTTGCGTGTTTGTTTCCCTTGTTGCTGCTGCTCTTGATGAAGGTGCAGCAGGAAAGCGAAAGGGTTTCACTCGATCCCGGCGGAGTCGGGGCACCTCCACCTGCGCGCAGGTGCGACCAGGCAGCCCCGCTGGCCGGCCGTGTCTGCGCCTGTGCGCTGCGGTGGTTTAGCTACAGAACTACACAGGTGCTGCGTGTGTTGTACGTGCTGATCGTGCAATGGGGTTTAAACGTCGGAATAGTTTGCACGCCAGGGCCAGCGCTCATCCCCCGGGTACACGTTTGCCCGGGCGCGTTTCCGCGTGTTTCCAGATGCGTTTGTGTAACAGAGTTTGTGTAGCGGGGTTTGTGTAACGGGGTTTGTGTAGCGGGGTTTGTGTAACAGAGTTTGTGTAGCGGGGTTTGTGTAACAGGGGTTTGTGTAGCGGGGTTTGTGTAACAGGGTTTGTGTAACAGGGTTTGTGTAGCGGGGTTTGTGTACAGGCAGTGGTATTCCTGGAACTTCCGCCCAGCCCCCACGCTGCCCCCGGCCCCCCGGCCCTCTTCCTTCAGCTGTGTGGGGATGTGAAGTGCTCTGCTACGGCTGTCTGCTCTCTAACAGGCTCCGCTCATTGCAGTTGCAGACAGGACACATGCTTTAAGGTTACAGATGCAAAATATGAGTACAAGTCCGGttctttgtttgtctttctccaTTTCAAAATGGTAATTGCAAGAGGATTTGTTTATGCAATTGCGCCCGTTTGCTGAAGACCGGGAGGAGCGTTATTGTGGGCATCTGTGTCATTCAGATTGAGCAATTGTGCTTTCCTGTTGAAGAACATGAGATAATTGAACAGTAGCCTTTTTTATGCAATGACATTACTTTGATAGGGTGATACGTGTTTACGACGCCTATAAAGTGTAGCCTGGAGCCCTGTGGTGTCTGCTACAATGGCATTGTCTCTCAGCCTTCAAGTGCAAACTTCTCTGTCATGCTCTTTGCTTGGTAGGGCAACAAAATGAAGATCAGAGTCAAAACCTCTGCTCAACGCGCTGCTTTTACATCTCCTGTTATCTCTCTCACCCACGTACGGCCCGTGTGTGCCTTAGACATGTCAAACCACCACAGCCTGTGAGGTGTTAGAGCAGGCTTCTCAGAAACCTGGTGCAGCAGAGCTTCCCATACGCACAACACCCACCGCATCTTCTGCTTGCGTCTTGGGGATTCTGTGCCGCCGGTGTGACCCTCGGCTGTGCCCCAGACCGATGACGTCAGAGATCTAGAGTGATAGAGGAGTGGGATTTTAGAGAGTCAAGATTTTGGGCGTCGTGCTGGAAGACACCTGCTTCCGTGGCAGGGATGCCGAAAGGCCGTTAAACCACAAGACATCTGCAGGCATCGTCTGAAATGCAGCAAAAGGGGAATATGACATTGCATGAAGTGTACGAGACTCTTGATAATGgaaaaaactacttttaaaaTAGCGTGTTTATCaactgttttgactttggtttCAGTACTGCTTTTCAGCGAGGTGTTGGCATTGATggattttgtaaaacattttggaccagtgagtgtgtgtgtgtgtatgtctgtgaaAGAGAGCTATGCCATTGTCTACCTTTGATCCAGGCACACGTTTGCAGGTCCCACGCGAGGGAGCATTTGGATGTTATGAATGGGTTATATTGTCCACATTAATTCAGCCAGATCCAGAGAGATCACACTTTTGAGATGGTCAAGTAGGCACATCTGTCCCCCACATGGCTTCTCTGTTGGTCTGTTCCAACtttccattaaaacacacacacacacacacacacacacacacacaggttttgaGTGAGTGCTGTAATGTCTCCTGTGTGGCTCTGTGTGACTTTCTTACGCAATTCATGcgttcagatttttgttttctatggtctctgtactgtattatcATTATAAGTTGTAGTAGCGACAATCTTTATTCGGATCCTAGCATGACTGGACACCAGGCACGTGTCGGCTCTGACCATTTCCTCTTTCTAAGCCTGTGTTTGCAATTCAAACATGCCGTGTTTGCTCTGTATGTCAGCGCCGTGAATGACTCGACAGGAATGGCGCTCCTGATCCTGCAGGTCTGTGCGTGCCTAGGACCAGACTTTGACTTTGAATTTCCCTGAAAATATTGAGTTCCCTCACCGTATTGCacttcatatttgatttatgAGAGCTCCAAAATAGCACACTGACCCAAAACAATTAGCTATTTTGAAGGTCTAGTGTGGACGTCCACCTTTTCATGGAATCACCCTTCTGAACTTAAAATGTCAAGTATGCATtaatggctggtttcacaggccTCGGTTAGCTCGACTCTAGGGATACTCTCCCTAAAATAACAGTGGGTGGTCCATGACTAGTGTCTTCATAAActgctaattaataaataaactttaatgACTATCGTTATCATTGTTGCATTTCTTGGTATGAAATCGCCCCTGTGTGCCCTTGGTTGGAGTTTTCATTGTCTTCTTCACCCCAGAACTGTCTTGATGTCTTGGTGTTCATGCCCAACAAAAGCAACATGGTCATGAAGAACACTGCCTTAAATTTGAGCCCTGCGTCTGAACTCTCTTGTAAATACTTCCCCTCGTCACAAGTTCTGCTGTGCGCTGATGACCGAGTCTGAGTCACTCTTGTTTTCAGGATCTTGATGAAGTGGATGCACGAGGTGTGGTGATGCAAGGGGTTAAAAGAGGCTTCCTTCTTCATCTGAGGAAACTTCACTGCGAAGCCTGAAGTTCAGATACAGTCCTCACTGAGACCAGGATGGAGCCAGGCAAGACGCTCACAAtgtcagaggaggaggagcagcagcgGAACGGCAGTGACCAATCGGACAGCCGGCTGAGGAGCAAGAAGCCGCCCAGCCTGACTATCTGCATACCACCCCCAGAGGACGAGGGCAAGAATGAGGGGGACAGTGCCAAACAGCCGTCCAGACCCTCCCTGAAGATGAGTCTGAGCCAGCAGCGCTCCAGCGACATTGAAGATGGGGGGGGTGCCAGCGCCCACAGAGCCGCCTTCCAGAGACAGACCTCCATCTCGCAGAGCATCCGCAGGGGCACGGCGCAGTGGTTCGGAGTGGGCGGTGACTGCGACACCAAGCAGCAGGAATGGCAGAGGAAGAGCCTGCGCCACTGCAGCCAACGCTACGGGAGGCTCAAGGCCCAGTACCGGGAGGCGGAGATGCACAGCCAAGACATGCCTTCCTTCCAGGAATCTGTGGTTTTCATGCAGTCTGCAGAACAGAAGATCGTGGACCCCCTGGCTCGGGGACGGGCCTTCCGCTACCCTGATGAGACGGACCGCCCCCGCACACCCCACACtgtgcacccccccaccaccccggGCGTCACCTCGCTGTCCTCGTTCTCCAGCATGCGCTCGGGCTACACCCGCCTGCCGCGACGGAAGAGGGAGTCCGTGGCACGCATGAGCTTCCGCGCCGCCGCCCTGCTGCTCAAGggacGATCGGTGCTGTCTACCTCCCAGCCGCGCCGCAGTTTCCCCCACAGGAGTTTCGCTCACCCCAGCTGGCTGGAGGAGGACACGGTGGACGCCGCCGACACCTACGACTCCTTCTTCAGTAAGGCAAGGGCAgctatctctttctctctctccctctccctccctcccctgtgGCTGGCCCGCTCCGTCTGTGGGAGTCCTGCGATCGATGCCCACGAGGAGATCTCCATGGCGGACGATGTGTTTGAGTCGCCACCCCTCTCGGCCAGCTACGCTCCCCACCACCCCGGCCATTTCACGGTGGAGGCCCAGTCTGGGGAAGGGAAGTATCCCAGCCTGAGGGATTTGTCCCGTTCTCCCGCCCTGGGCGGCCCCCCCAAGCGCCGGGGCCGGCGGATCGCCTCGCAGGTCAAGCACTTCGCCTTCGACAAGAAGAGGCGCCAGTACGGCCTGGGCGTGGTGGGCAAGTGGCTGAACCGCACGTATCGCCGCAGCCTGAGCAGTAATGTGCAGAAGCAGCTGGAGGACTTCAGCAGCCACAGACCCTACTTCACCTACTGGATCACCTTCGTTCACATCATCATCACCCTGCTGACCATCGGCACGTATGGCGTCGCCCCGGTGGGCTTCGCGCAGCACGCCTCCACGGAGCTGATCCTAAGGAATAAGGGCGTTTACGAGAGCGTGAAGTACGTCCAGCAGGAGAACTTCTGGATCGGGCCGGGCTCGGACGCACTCATCCACCTGGGAGCCAAGTTCTCCCCCTGCATCCGGCAAGATCAGCAGATCCAGGAGCTCATCCAGAAGGCCAAGGCCTTGGAGCGTCACTCCGGCTGCTGTGTGCAGAACGACAACTCCGGCTGTGTGCAGACCCAGCAGGCTGACTGCTCGGAGACACTGGCGACCTTCATAAAGTGGAGAGACGAGGACGTGACGGACATGAGAAGATCGTCGGGCGCCGTGTGCCACCAGGACCCCAGGACCTGTGAGGTGCCAGCCTCCGCAAAACCACATGTCTGGCCCGATGACATCACCAAGTGGCCGGTGTGCACAGAGCAGACCCGAAATAACCACACTGGGCACAAGCACATGGACTGCGACATCAAAGGCAGGCCCTGCTGCATCGGGACCAAGGGCAGGTGTGAGATCACCACTCGGGAATATTGCACCTTCATGCACGGCTACTTCCACGAAGAAGCCACGCTCTGCTCACAGGTGCACTGTCTGGACCAGGTGTGCGGCCTCCTCCCGTTCCTCAATCCTGACGTTCCCGACCAGTTCTACCGGCTGTGGCTATCGCTCTTCCTGCACGCGGGGCTGCTGCACTGCCTGGTATCGGTTGTCTTCCAGATGACGGTGCTGCGCGACCTGGAGAAGCTGGCCGGCTGGCTGCGCATCTCCATCATTTACATCCTCAGCGGCATCACCGGCAACCTGGCCAGCGCTCTCTTCCTGCCCTACCGGGCCGAGGTACGGCACCACTCCGCCTCTGCACGAGGGCTGAGCACAGTCGAGCAAAATGGGGCGGGGCGGTTTGTGGGGCCAGCAGGGTCGCAGTTCGGGCTGCTCGCCTGCCTGTTCGTGGAGCTGTTCCAGGGCTGGCAGATGCTTGAGAAACCCTGGAAGGCCTTCCTGAAGCTGCTGGGCATCGTGCTCTTCCTGTTCCTGTGCGGCATGCTGCCCTGGATCGACAACATTGCGCACATCTTCGGCTTCCTGAGCGGCCTGCtgctctccttctccttcctgCCCTACGTCACCTTCGGCTCCTTCGACCAGATACGCAAGCGGGTCCTCATCATCTTCTCCCTGCTGGGCTTCCTGGGGCTGTTCTCCTCGCTCATCGTCTGGTTCTACTTCTACCCCATCCACTGGCACTGGCTGGAGCACCTCACCTGCCTGCCCTTCACCAGCAAGTTCTGCGAGAAGTACGACATCGACCACCTGGTGCACTAGAGCGTGGTGTGTGTCGGCCGATTGGTGCCCCCTTCAAACTTCTAAGCGACACCCTCCCAAACCACCACCTCCTTGTAGGAAATGGGGACCcccttccctctgctccacctCTCCCCTGAAGATCACCGTGCTGTGAAAGTCCCGCTATGGACACCTACAGGTCAGCGTGCCAGCCGGCTGTGGTCTAAGTGTGGTTGTTTAGTGTCCAGGTTTTAATCCAGTGTTTGCTGTGAAACTATGCAGCCTGGGGTCCGAACCCAGACAGCCAGGCACCGCCTGAGACCAGCTGCCGGAGCTTGCTGAATACCCTGCCTGGGCTGAGGGGGTATCCATGGAAAGAGCTGTGATTTCTGACTGGGCAATGACCAGCGGCCGGGGCACCTAGGGGCCCCACTGAAGGGAGCAGAGCCACAGCACAGCCCTCTGTTGGGTCGGCCAGGACTCCTGATATACGGACTGACTGCTGGACTGGGTGCAGACTTATTCTTTTGTGAAAAACACTGGAATCCCTCCACTGTAAACActaattttttatattttttattttttatgtctcATTTTCATATGCCTACATTGTTTGTTCAGGGAAGCCATAGGTTTATGTGTTTTGGCCTAATTTTCTATCTTACTGTAAACTACAGgtgaaagcagagagagagagttggttGGTTCTAGTAAGGGATGAAATGTACAAGGTTTTTTGTTGTCATCTGCAGGGGTAGTATTTTACAAGGTTTATTCTTGtaggttttccatttttaagAGACTTGAGACGTTCCCCtatccgtctctctctctcggttcTGTCCTGAGGCTGTGGTGAATCCCAGGTGTCAGGCTTTAAGAGCTGTTGGATCCTCAGGAGTGGCTTCTGAAAGATTATTATGCATTGGTGCCTTAAATCAACATACAACCTAAGAATTGTACCATTTTAATCTCATACTAAACTGTGCATTATGTCCCATCATTTGAATTAGCTTGACAATGAAGAAAGCACTACTTCtggattacacacacacacacacacgcacacttacTCATGCAGTCCGGATGCAGTACAGGCTTCTGTGGTGCAATTTGAATCAAATTCATTTCCTTGCTAGTCCTACTGTTCCCAAAGCTGCAGGGAAGGCACATTGTGTAGATGAGGacgggagggagggggggtgtaCAGAACATTAGCAACAAGGAAAACACATCTGGCGTGTGTGTTTTTTGAtgagtaaataaagaaaagggaaaaggaagGCATTGCTAATTACAGGATGTCATCATAAGGTGCTGAGGGTGTAGATTGTCCTATGCAGAGTTCAGTGGTGGGACATAGGATGCGGGTGGGAGAAATATATTGTGGAGTTTGAGTGTGTAAGTAAGCTACAGTTCCCATTGTTCGTTTTGGGTGGGTGGGGCAAAATCAAActtattttggttgttgttcatgtgtttgtttactgAGCCACGAACTTAAGTTGTAGCGTTTGGGGCTCTTGTCAGGTTTGTGAAAGGTATAACACTTGCTCATTCTAGTGGTCTGTAttacacaaatgtgtgtgtcGGCTATTTTCCCAACAGAAGGGTGACTTGTGGCCACCAGTCAGCACTGGTTATTGACGCACACTGCTGATGCACACAGTAGGAACAGACCAGTCCCATTGCACAATATCAGTACTCCAGAGCTGCCCAGCCTTTATGTAATGAGCCGGTAATtggatcaattaagtaatcaattAGTTTCCATTAATTAACACCGGACACACTGTATAGGAATACCGGGCTGGGCTGCTATCTCACGGATCACAATATGGCATTGTTGTGGAGCTAAACGTTTCAGGAGGGAATGGGTTTCTTTTCTGTCAGTTCAGTGTTTagatttttctcttctttcttgtGGATTAAAGCCACCAGGCAAGATTTACCATGTTCACCAGATCGACCAGGTTGTTATTGAGACAGAGCTGCAGTGTTTGTCTgcagcccccctcccccagtgCCGTTTGGGATTACGTTTCTAACCCGGCAGGTGTCTGATTTAaagctataaaaaaaatgactgtgAAATGGATTAAACCCTAATTGAGGGAGACTGACTTTGAGGGGCTTTGCTTAGTCATTTTCTCCCAGCTGTGCGAGTGCGATTACCCAGGGTGATTTTTACAACAATGAAACCTTTCTAAGATTGTTATTAGGAGACGGCCACACATCAATAGACTCCAGGGGCTGGGGTTTAGTGTCCATTACAGCTCAATAAACTGCCATTGAAGACTTCTCTGCCCACTTTAATACTGCAAGTCGTCTTACTaaatctgaatgtgttttttcttgttactCCTGTGTACCCGATACTCTGTCCAATCAGAACTATGCCTTCATGCCTTTGAGTTTGCCTTGAATATTTGTAAAACTTTCAGGAAATGGAGGGGGAATAGTGTCTATTATTTATTGACATTAAaacaactgtttaaaaatgaaatgtttacttgtactaaaaatatatttttgtgctgCATATTTTGATATGTCGAGAACACTCCTTTGTAcgttttaaaacaatcttgcattttatctttgaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013344 True 8033 mRNA 0.52 20 29033142 29059640

Neighbor

gene id symbol gene type direction distance location
AMCG00013346 NA coding upstream 3934 29022007 ~ 29029208 (+)
AMCG00013345 NA coding upstream 21867 29004045 ~ 29011275 (+)
AMCG00013343 LOC103354899,LOC102794595,LOC101480902 coding upstream 62988 28969528 ~ 28970154 (+)
AMCG00013342 NA coding upstream 97101 28918753 ~ 28936041 (+)
AMCG00013341 rptor coding upstream 118302 28841752 ~ 28914840 (+)
AMCG00013350 NA coding downstream 8190 29067830 ~ 29068402 (+)
AMCG00013351 ube2o coding downstream 20360 29080000 ~ 29091607 (+)
AMCG00013352 znf207 coding downstream 55813 29115453 ~ 29121435 (+)
AMCG00013356 ern1,LOC106601756,LOC106606681 coding downstream 90602 29150242 ~ 29156585 (+)
AMCG00013363 prkca,LOC107664393 coding downstream 508849 29568489 ~ 29573439 (+)
G43712 NA non-coding upstream 294389 28738123 ~ 28738753 (+)
G43673 NA non-coding upstream 643182 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1615355 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 2022491 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 2102889 26872821 ~ 26930253 (+)
G43810 NA non-coding downstream 90338 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 97059 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 117411 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 119458 29179098 ~ 29202721 (+)
G43895 NA non-coding downstream 374410 29434050 ~ 29446698 (+)
AMCG00013336 NA other upstream 347004 28676542 ~ 28686138 (+)
G43682 NA other upstream 544359 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 960343 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 1097204 27928708 ~ 27935938 (+)
G43476 NA other upstream 1442324 27589139 ~ 27590818 (+)
G43802 NA other downstream 44649 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 580983 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 826122 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1003740 30063380 ~ 30074748 (+)
AMCG00013388 NA other downstream 1024004 30083644 ~ 30090117 (+)

Expression


Co-expression Network