AMCG00013345


Basic Information

Item Value
gene id AMCG00013345
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29004045 ~ 29011275 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013345
GCTCAGGCCGAGGGAGCGGTGAGATTACGcagctgtgtgtctgttcagAGGGGTGGGCTCTCCGCACTCACGCTGGCAggttcacacaaacacagggctGGGGAGAAGTTAAGAGACAAGGCAGACAAGAAGGCAATCTGCTACTAagccagacagagagagaaaaacagagagtGAGGGACCATCTGGAAGGGAGTGTGCAGGAGAATTGACTTAgccaaagaagaaagaaagaaaaagaaagataaaaagatAGCAAGGAGAAAGACGAGAGCAGGGGAGGGTTCCCTGGATATATCACTCCTGCTCTGCACTGCTGTTCGctccttccccccccccttccttaAGTTGTGCGAGGATTGTGCCAGGAGTGTCGGGGAGGGGGGATTCCTGGATGGAGAAAGTGCAGGGAGAAGGGGAGATGGAGAGACGGGAGAGAGCTGACCAGCTCTCAGAGGCCGAGAGGGCGATGATCCGGGACACCTGGGGGAGAGTGTATGAGCACTGCGAGGACGTGGGGGTCTCCGTTCTCATCAGATTCTTCGTGAACTTCCCCTCAGCCAAGCAGTACTTCAGCCAGTTCCGAGACATGGAGGACCCCGAGGAGATGGAGCAGAGCCCGCAGCTGCGCAAGCACGCCCGCCGGGTCATGAATGCCATCAACACGGTGGTGGAGAACATCAGCGACGCCGACAAGGTCTCCTCCATCCTGGGGCTGGTGGGCCGAGCGCACGCCCTCAAGCACAAGGTGGAGCCCATGTACTTCAAGaTCCTAAGCGGGGTGATACTTGAGGTGCTGTCGGAGGAATACCCAGACTGCTTCACGGTGGACGTGCAGCGCGTCTGGACCAAACTGATGGGGGCCGTGTACTGGCACGTAACCGCGGCCTACAAGGAAGTGGGCTGGGTGCAGCTGTCCAGCTCCGCGGTGTGAAGGGcgg

Function

GO: NA

KEGG:

id description
K21894 CYGB; cytoglobin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013345 True 941 mRNA 0.58 3 29004045 29011275

Neighbor

gene id symbol gene type direction distance location
AMCG00013343 LOC103354899,LOC102794595,LOC101480902 coding upstream 33891 28969528 ~ 28970154 (+)
AMCG00013342 NA coding upstream 68004 28918753 ~ 28936041 (+)
AMCG00013341 rptor coding upstream 89205 28841752 ~ 28914840 (+)
AMCG00013340 NA coding upstream 204739 28795746 ~ 28799306 (+)
AMCG00013338 NA coding upstream 270374 28727573 ~ 28733671 (+)
AMCG00013346 NA coding downstream 10732 29022007 ~ 29029208 (+)
AMCG00013344 NA coding downstream 21867 29033142 ~ 29059640 (+)
AMCG00013350 NA coding downstream 56555 29067830 ~ 29068402 (+)
AMCG00013351 ube2o coding downstream 68725 29080000 ~ 29091607 (+)
AMCG00013352 znf207 coding downstream 104178 29115453 ~ 29121435 (+)
G43712 NA non-coding upstream 265292 28738123 ~ 28738753 (+)
G43673 NA non-coding upstream 614085 28389689 ~ 28389960 (+)
G43438 NA non-coding upstream 1586258 27270028 ~ 27417787 (+)
G43402 NA non-coding upstream 1993394 27010372 ~ 27010651 (+)
G43326 NA non-coding upstream 2073792 26872821 ~ 26930253 (+)
G43810 NA non-coding downstream 138703 29149978 ~ 29151334 (+)
G43799 NA non-coding downstream 145424 29156699 ~ 29158493 (+)
G43853 NA non-coding downstream 165776 29177051 ~ 29178266 (+)
G43855 NA non-coding downstream 167823 29179098 ~ 29202721 (+)
G43895 NA non-coding downstream 422775 29434050 ~ 29446698 (+)
AMCG00013336 NA other upstream 317907 28676542 ~ 28686138 (+)
G43682 NA other upstream 515262 28484273 ~ 28488783 (+)
AMCG00013317 NA other upstream 931246 28007514 ~ 28072799 (+)
AMCG00013310 NA other upstream 1068107 27928708 ~ 27935938 (+)
G43476 NA other upstream 1413227 27589139 ~ 27590818 (+)
G43802 NA other downstream 93014 29104289 ~ 29104577 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other downstream 629348 29640623 ~ 29667051 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other downstream 874487 29885762 ~ 29928697 (+)
AMCG00013382 NA other downstream 1052105 30063380 ~ 30074748 (+)
AMCG00013388 NA other downstream 1072369 30083644 ~ 30090117 (+)

Expression


Co-expression Network