AMCG00013385


Basic Information

Item Value
gene id AMCG00013385
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 29991300 ~ 30002882 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013385
ATGTCTGTTGACCCTACGTCATATCCGGAAACAAAATGCTGGGCCCGACAGCCAATCGGGATATTTGGCTGTTTTAAATGTCCGAGAGCCGGAGCCGCTGAAGACGCGTCTGATGGGAGAGCAGATCTTCGCGATCTGTCCGCGCTTTTAAACACGTCAACTCCCCCGTTTTCGCAGCGCAACACCCGCTTTGGGAATAAACTATTCATGGGAACCCAGGAGGAGAGAGACTGGGTGGATGCTGCCAATGATCTGCTCAGCAAGTGTCACATTAACCTGCGGCTAAAGAAACTGACCGACTGCGACGCCGGAGTTTTCGTTGCTTTGTACGAAGCGATCTTGGGTGATAAAGTCCCAGATTACATCGCCGCTCCCCGCAGCCAGGAGGACGACGCCCACAATGTGCAATCTGTGATCGACTCGCTGGCTCTGGATTACCTGCAGATCAGCTTGTCTCACATCACAGgagaaaatgtgGTCCGAGGGGACAAGGAGTCGGTCAGGAACCTGCTGGAGATCTTCGACGGGCTGCTGGAGTATCTGACGGAGCAGACGAGTGAGGAGGACTCCCAGACCAGCGATGAGCCAGACTGTGTCTCGGACGAAGCGCCCTCACCGGCCCAGGAGCCGCCACTGGAGCGGCTGGCGGACGAGAGGGAGGCCCTGTCTGAGTTCCGGCCTCCGTCCTCCAGAGGGTCCACCGCGCAGTCCTCCCAGTACTCCGGGCCGCTCTGGGACATGGAGGGGTCCGAGTCCACGGCGGAGCTGATCAGACTCGGGGACTCTGCGCGCACCTTCACGGCCAAAAGCCAGGCTGGGAGGAACGGCAGCCCCCCCTGCACAGAGCCGCCCAATGGGATCCACCGGACTGGCAATTCCTGCACCGGGACAGGGGCATCGCACCATAGAGACCAcgCGGTGGAGCCCGTCTCTCTGCCGGCGGCGCCTGTCTCTCTGTACGTCCCGCACGGCCCTGCCACGCAGCTCAGAGAGCCCCTGCGCCCCGCCACACTGCTGCAGCCCCCCTACCAGCCGGCGCAGCCCCCCACAGAGGGACTCGCGGACGTGCTGATGGACAGATCGCTTCCCGCCAGCGCCTCTGGACAGCGGGGGGAGGAGGTCCCTGTGCCGAGAACGGGCAGCCCGTCCCCCAGGCAGCTGTCTGACACCCCCGCCCTCAATGGCCTGCGCTCCCCCTGCCACTCTCCAGTGGAGAGCGAGAAGTCAGAATCCAGCAGCTCCACGTCAGCCAGTCGGAAAAAGAAAACGTCCACGAGCACCGAGCTGGAGCTGCCCGAGTCCGGCGCCACGGGCAGCAAGAGGGTGGCCTTCCGCACGCAGCCCGACATCCGGCTCCTCACCCTGCAGAGCGAGCAGGAAGGGCTGGCAGACTGGGGCTccggggaggaggaggaggaagaagaggaggcaGGCTCCGGGCAGCAGGGTCGAGCCAGGCAGCAGAACCTCCGAGGGCCCGGGGACCAGACGAGCCTCAGCGAGGGCAAACTGAGCGGCGCCAGCCCGGGGGAGGAGCCGCTGTCCTGGCGCCGGCTGAAGAACCGACAGAAGgagcaggagctgcaggagatGTCGGACAAGCTGTCCCGCCGTCTGGAGGAGCTCCACGTGATGCTCCAGCAGGCCCTGGGGGAGGGTGCCGAGACGAGCGAGACCAGGGAAGAGGACAAGCTGTCTCACCACAGTGACAGCTTCATGGAGTGTCGCCGGACCAAAAGACAGACGGGCCCGCCGCATCCCGCCAAGCCCCCGCGCACGCGCTCGCTGTCGCCATCGCCCCCCCCGGCGCGGCGCCACCTGCAGGTGCAGTTCGAGGAGCCGCTGACCCGAGACGCGCAGGGCCGCCACCTGGCCAGAGTGCGGCGCCACACCCGGGCCGAGCTGGACTCCTGCAGGCGGAAGGGACAGGTCGTGGGCAGAGCGTACCAGGAGGAGCTGCGCCAGTACGAGGACAGAGAGCGCATCCACATCGCCAAAGAGACGGCCAAGGCTATGGAGACGGAGAAGGAGTATAAAGAGGCCCTGCAGAAGGACACCCCCTCCACCCAGAAACCGTCCCGCATCTACTCCTCCAAGagcgccccccccacccctcgaGCGGGCCCCCACACCCCCTCCAGAGGACGCGTGCACCCCCGGAAACCCACCCCCATGCGGATCCGGGACAACGACCTGCTGCCCCAGCTGCTGGAGGACCTCCCCGGGCTGCAGCTGTCCCCCCACACGCTCAACAGGATGTGGAAGCAGCAGCTGCGGCAGGTGGGCAATGTGGCGCCGCCCCTCAGCGGCCGCGGCCGGAAACAGCTGGACAGCCAGgTGGAGGAGGCACAGAGGAAACATGACCTGCTGGTGGAGATCATCCGCAAAGAACAGGAGCACAACCAGCGACTGAGGGAGTTTCAGGATCGCATCCGTCTGCAGAAGTCTGCGCAGACGCGGCTCAGGGACCAGAGGCAACAAGTGGCTCGAGCCCGAAAATACTACACTGAACACCACGTGCAGCTGAGAGCGCGACGCATGAGAGCACGGACACGAgaggagaggATGGTGAGGCAGCTGTTCGAGGAGGGGCTGGAGCTGCAGAAACAGCGGCTGCTGGAGATCCGGGCCGACGCCAAGGAGCAGCGCCAAGAGCACCGACGCCGCCACCGGGACGAGCTGCAGGCCATGGAGAACTACTACAAGGACCAGTTCTCCCTGCTGGCTGAGACTCTCGCTCAGGAGCGCCAGGAGATCCAAGTCCGCAAGAAAGCGCAGGAGAAGGCTCTGCAGAAGATGAAGAAGGAGCTGCGCAGTAAGATGCAGCGGGAGATCGGGGAGCTGCAGCAGATCATCCTGCAGAACGATCGGGACGACTTCTCCTGCGAGCGCGAGGTGGAGAGACTGCAGCAGCGCATCCACACAGCCTCCTTCCAGTACAGCGCCGGGCACCTGCTGTAGGACAGGACCTTCTGCGGAACCTCAGGGCCGGACACCTGCTGTAGGAGCCCCCCGCGGACCCCGACGCCCGGCCTCCCACCCTCGTCACTTTCATTgtcgctgctgctgctcacaagactaaaggatttatttttttgtcagttttaaactaaattatttgaGCGTTAACACCTGAATATATAACTCCTCCTCTGCTCTGCGCTccagtctgtgtgtttgataACGAGGTTAACGAGATAACCAGCATCTCCTTCCggacactaataataataataatgaaggccaactttttttttttttaactccctaagtgaattatttttatttcctgtttgtttgagTACTTGCTGGATGCGTCTCTCTCCCTTAACACCGTCTTAACACTGTAAAATGATTGTACAGACCggcttttaaattatttattaaaatcgGACTacttttggttttagttttagtctcTGTTGTGGTTTCACACAGTGTCGCTAGAGGGGGCTGTGGGACTGACATTAGTAAAGTGGTCAATGCTGGAGGACGTCCAGTAGGGGGCGGCGCAGAGATCACAGGCTGCCTCTCTGGGCCAGCCACTCAGAGTCGATGTCCAGCTGGACCCggggctggagagagagggcacTGAAGATGGACGGA

Function

GO: NA

KEGG:

id description
K16544 CEP95; centrosomal protein CEP95

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013385 True 3606 mRNA 0.61 22 29991300 30002882

Neighbor

gene id symbol gene type direction distance location
AMCG00013376 LOC107081327 coding downstream 56130 29931650 ~ 29935170 (-)
AMCG00013372 psmd12 coding downstream 188057 29796583 ~ 29803243 (-)
AMCG00013373 LOC106564877 coding downstream 197174 29746227 ~ 29794126 (-)
AMCG00013361 NA coding downstream 541819 29445941 ~ 29449481 (-)
AMCG00013362 NA coding downstream 545428 29444447 ~ 29445872 (-)
AMCG00013389 rhbdl3 coding upstream 88980 30091862 ~ 30100704 (-)
AMCG00013391 NA coding upstream 114918 30117800 ~ 30126501 (-)
AMCG00013393 rhot1a,LOC108430568,LOC107729179 coding upstream 123815 30126697 ~ 30153358 (-)
AMCG00013392 NA coding upstream 152380 30155262 ~ 30164478 (-)
AMCG00013404 NA coding upstream 319383 30322265 ~ 30332700 (-)
G43919 NA non-coding downstream 491727 29497710 ~ 29499573 (-)
G43831 NA non-coding downstream 869981 29119373 ~ 29121319 (-)
G43834 znf207,LOC107753267 non-coding downstream 873339 29115222 ~ 29117961 (-)
G43725 NA non-coding downstream 1252527 28737957 ~ 28738773 (-)
G43724 NA non-coding downstream 1273360 28716291 ~ 28717940 (-)
G44086 NA non-coding upstream 85921 30088803 ~ 30090147 (-)
G44230 NA non-coding upstream 304144 30307026 ~ 30310766 (-)
G44213 NA non-coding upstream 381804 30384686 ~ 30455606 (-)
G44261 NA non-coding upstream 531089 30533971 ~ 30539317 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding upstream 537431 30540313 ~ 30562691 (-)
G43869 NA other downstream 736984 29253396 ~ 29254316 (-)
G43684 NA other downstream 1523394 28467312 ~ 28467906 (-)
G43594 NA other downstream 1918513 28068213 ~ 28072787 (-)
G43473 NA other downstream 2422149 27568764 ~ 27569151 (-)
AMCG00013295 NA other downstream 2698227 27273229 ~ 27293073 (-)
AMCG00013384 NA other upstream 37323 30040205 ~ 30061634 (-)
AMCG00013386 NA other upstream 77732 30080614 ~ 30083441 (-)
AMCG00013390 NA other upstream 162935 30165817 ~ 30184424 (-)
AMCG00013405 NA other upstream 283760 30286642 ~ 30290867 (-)
G44243 NA other upstream 397005 30399887 ~ 30423025 (-)

Expression


Co-expression Network