AMCG00013391


Basic Information

Item Value
gene id AMCG00013391
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30117800 ~ 30126501 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013391
ATGCGCTACGTTGGGGTGGCGGTGCTGACGCGCAGCCGCGCCGGGAATGCAGAAGCGCCCGTGAGCGCCGCGAGGAGGAAGTGCGCTGCGGACCCGCACCGGCGCGAGAGCCCCCCGAGCCCGGCCGCCGTCCCCATGGCGACGCAGGAGCACGAGCTGGTGTTCGAGAGCTTCTTGAAGAAACGCAAAGACAagctgTCGCACCTGCGAGGCCAGTACTACATCTACACGGTGCAGTCAGTACGTGAGGTGAAGACAGATGACAGCAAGCAGTTCATGTTTGAGATCACCATGAAGAACGGCAAGAAGAAGCTGCTGGCTGCAGCGACGGAGGAGTTGCGCTCAGTGTGGGTCAGCCTGCTGTGGAAGGCCATGCAGCTGCCGGGTCCAGGGAGGACCGACTCTGCCTGTATCTGGCATGACGTGGCAGACCTCACGGTGCGGGGGCGACTCAGCACACACAGCTCGGACTCGGACAGCACACTGGACAGCGACCCGCGCAACTCGGCGCTCCTGGACCCATTTGCCCCCCCACTGCCCACCACTCCGCCCCCCCACAGCGCAGGCAACACCAGCTGCAGCCAGAGGACCAGcactgaggaggaggagcagcacaCAGAGGGTGCCTACGACATGCTCCCACCCACGAGAGgacaggaggaggaggaggaggaggaggaggaggagaaggaggtggAGGGTGGGCAGGAGCTGTACGATGTCCCTGCGTCCTGCCGAGAGGCCAGCGGAGGGGCGGCCCAGAGAAACCGAGTCTTGACAGAAAGCATCTACGATGTGCCGAGGTCTGTGCTGAGGCGGTCATCTGAAGACAGTAAGGGTCTCGCAGGAGCGCCGAGCGGCGGCTCCACCCTGCTGGATGACATCAAGCGCAGCCTGGGCAGCGATCACGTGAGCTGGATCAACGACCCTGGGGAGATGTAGCCTGGCAGGACGGGGGGCTGCTCTCCTCAGCGTGTGGAGAGTTCCTGTAGTCCAGTGATCGCTCAGTGGAGGAGCTGGGGACCACCACCACCAGAGGTCCTGGGCAGTGTGACGCACCTCAGCTCTCTCCCCCAGCCTGTGCCGAGGACCCAGCATGGCCAGAACTGCACCTGCACACGCCTGTGTGTCCACAGTGTCCACGCTCGCCTGAGAGTGGGGTCCAGCAGCTGGAGGTGGGTGATATACAGCATCATGCAGCTGATCACAGCTGGAGGGGCAGGTTCCTGTCACGGTGCCTTTGTCACTGGACTGCTGGGAAAATAGGAATGGGTGCCAGTCACTAAAACTAATGTATCCATATGaagtatagatatatatacacacacgtttATTATTACAGATTGGTACTTGTATTGTTCTATATGGGGTCTTTGTATTTTATCTGGTGAATTGGGTCTTTTTCCACTTATGTGTCTGTTCGATCAGTTAGtaagatgtttttataaatcTACACTACTGCTACTTTTTGGGGCGGGTGGAGGGGtgacaaatgtttgttttttaaagcaaagtctttgttacaataaaaagaaaaaagaaaatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013391 True 1547 mRNA 0.58 10 30117800 30126501

Neighbor

gene id symbol gene type direction distance location
AMCG00013389 rhbdl3 coding downstream 17096 30091862 ~ 30100704 (-)
AMCG00013385 NA coding downstream 114918 29991300 ~ 30002882 (-)
AMCG00013376 LOC107081327 coding downstream 182630 29931650 ~ 29935170 (-)
AMCG00013372 psmd12 coding downstream 314557 29796583 ~ 29803243 (-)
AMCG00013373 LOC106564877 coding downstream 323674 29746227 ~ 29794126 (-)
AMCG00013393 rhot1a,LOC108430568,LOC107729179 coding upstream 196 30126697 ~ 30153358 (-)
AMCG00013392 NA coding upstream 28761 30155262 ~ 30164478 (-)
AMCG00013404 NA coding upstream 195764 30322265 ~ 30332700 (-)
AMCG00013403 NA coding upstream 206947 30333448 ~ 30340461 (-)
AMCG00013410 NA coding upstream 304163 30430664 ~ 30436741 (-)
G44086 NA non-coding downstream 27653 30088803 ~ 30090147 (-)
G43919 NA non-coding downstream 618227 29497710 ~ 29499573 (-)
G43831 NA non-coding downstream 996481 29119373 ~ 29121319 (-)
G43834 znf207,LOC107753267 non-coding downstream 999839 29115222 ~ 29117961 (-)
G43725 NA non-coding downstream 1379027 28737957 ~ 28738773 (-)
G44230 NA non-coding upstream 180525 30307026 ~ 30310766 (-)
G44213 NA non-coding upstream 258185 30384686 ~ 30455606 (-)
G44261 NA non-coding upstream 407470 30533971 ~ 30539317 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding upstream 413812 30540313 ~ 30562691 (-)
G44264 NA non-coding upstream 424888 30551389 ~ 30552050 (-)
AMCG00013386 NA other downstream 34359 30080614 ~ 30083441 (-)
AMCG00013384 NA other downstream 56166 30040205 ~ 30061634 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other downstream 89570 29926383 ~ 30028230 (-)
G43869 NA other downstream 863484 29253396 ~ 29254316 (-)
G43684 NA other downstream 1649894 28467312 ~ 28467906 (-)
AMCG00013390 NA other upstream 39316 30165817 ~ 30184424 (-)
AMCG00013405 NA other upstream 160141 30286642 ~ 30290867 (-)
G44243 NA other upstream 273386 30399887 ~ 30423025 (-)
AMCG00013409 LOC107590438 other upstream 329226 30455727 ~ 30464091 (-)
AMCG00013412 NA other upstream 342129 30468630 ~ 30482326 (-)

Expression


Co-expression Network