XLOC_000061 (stk16)


Basic Information

Item Value
gene id XLOC_000061
gene name stk16
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 5422439 ~ 5434261 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000118
GCGGCAGCCGTCAGTTTACGTCACGGTCACGTTTTCTTTGTACACGGAAGAAACCGGATAAATCAGCGGAGGACAGAGAGAGCGTCTTTTAAAGTGCTTCTCCCCCACCAATGGTTGGTGTTAAGCGATGCTCCAGAGAAGATGGGCCAGGCTTTGTGTATCTGCTCTCGCAGTGCCATCACCATTGACAACAAGAGATACTACTTTGTTCAGAAACTAGAAGAAGGTGGTTTCAGCTATGTGGACCTGGTAGAAGGTGCGCACGATGGTCGTTTCTATGCTTTGAAGCGAATCCTCTGCCATGACCGCGAGGCCCGTAAGGAGGCGCAGACCGAGGTGGAGATGCACCGGCTCTTTAACCACCCGAATGTCCTTAGCCTCACTGCATACACCTTCATGGAGCGCAGCGGCAAGTGTGAGGCCTGGCTGCTGCTCCCCTACATCAGTAAGGGGAGCGTGTGGTCTGTTCTGGAAAAGCTGCGGGATAAGGGAAGCTTTATGCCTGAGAGCCGAATCTTACACATTCTGCATGGCATCTGTGAAGGACTTAAAGCAATTCATGACAAAGGCTATGCACACAGAGATCTGAAACCCACCAATGTTTTGCTGGATGAAAACGATCGTCCTTTTTTAATGGACCTGGGCTCCATGAACAAAGCCAGGATTGAGGTCCGGGGGTCACGGGAGGCCATGACAGTCCAGgATTGGGCAGCGCAGAGATGCACCATTTCTTATAGAGCGCCAGAGCTGTTTAATGTGGAGAGTCACTGTATTATTGACGAGAGAACAGACATTTGgTCTCTAGGTTGTGTGCTGTACTGTATGATGATGCTGGAGGGACCATATGATTTGATCTTTCAGAAGGGGGACAGTGTGGCTCTCGCTGTCCAGAATCCAGTCTCCATCCCACAGCCATGCAGTTATTCTCCAGAGCTCCAAACGCTGCTCAGCTCCACTATGGTGACCAATCCTCAGGAAAGGCCCAGAATCGGCTGGGTTCTCGATCAGATCAAGAGTCTGCGGGGCTCAGACGGTACAGATATCGACACAAACAGAGTATGATGATTCCTCTGGCCGTCCCGTCTGTTTCCACTGGACTCTGGACATTTTGGACTATGCACTCTCTATTTCAGACAAAAATAACTCAATGAACTCATAAGCCTTGCAAACATTTGCTCTCTCTTACCTCAGTGAGCTCAGCGCACCATTAACACACTGTCTCAATTTCCGCCCTAAAATTCATGAAATTATGATGGTTTTGTGGGTCAAATTTGAGCAGGCGTGTTGCAATATTCACAATATTATCACACAAACCACATTAGAGAGTGCAATAGGTTTGTTCACTAATGTTACGTATCATCAAACAAGCTGTTTTCTGATTATAATACCCTTTTTTATTACTTGTATTTGTTTGtgcattttaaagaaccaaaaatgattatttataatGTTCTCAATTGATGTTTTAAGTGTAACTGACAGAAGTTAGATTATTTGGGAACACTTTCCAATAAGGTCTTGTTTTTACCATTAGTTAATGAATTAAAGGATTATGATAAATATCGGTTTATTTCATAAATGATACAATCGTTTATTGATTATTCACAATGCAttaaaaggggcagttcacccagaaatttaaa
>TCONS_00000119
TTACAAATCCGTTGATAAAAGCATTAAACAAATAGCTAACAATACCTACTGTAAATCTGGATCTTTCGGGTCTCTCGTTGAAAACACTGCCTGCGAAACACAAACCAGCTGTTCTCGAAGACGCCACGTTTACTGCAGTCGACAATTCAAGTCAATGTGTGTAACAACAGTCGTGAATTAATTCACAAAAACATTACGGAGTAATTAGAGTTGTTTTACAGCAACTCGCTGAAGTCTAGGCTGACATGTTTTGAGCTCAACATCGCACGTCAAAAGGGGGAATAATATAAGGAGCAGTGCTTCTCCCCCACCAATGGTTGGTGTTAAGCGATGCTCCAGAGAAGATGGGCCAGGCTTTGTGTATCTGCTCTCGCAGTGCCATCACCATTGACAACAAGAGATACTACTTTGTTCAGAAACTAGAAGAAGGTGGTTTCAGCTATGTGGACCTGGTAGAAGGTGCGCACGATGGTCGTTTCTATGCTTTGAAGCGAATCCTCTGCCATGACCGCGAGGCCCGTAAGGAGGCGCAGACCGAGGTGGAGATG

Function

symbol description
stk16 Predicted to enable protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in Golgi apparatus. Orthologous to human STK16 (serine/threonine kinase 16).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-050417-102 Predicted to enable protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in Golgi apparatus. Orthologous to human STK16 (serine/threonine kinase 16).

Ensembl:

ensembl_id ENSDARG00000037777

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000118 False 1643 mRNA 0.45 8 5422439 5434261
TCONS_00000119 True 548 mRNA 0.46 3 5422576 5426706

Neighbor

gene id symbol gene type direction distance location
XLOC_000060 tuba8l2 coding upstream 3323 5402476 ~ 5419116 (+)
XLOC_000059 NA coding upstream 108844 5311479 ~ 5313595 (+)
XLOC_000058 spry2 coding upstream 144856 5273481 ~ 5277583 (+)
XLOC_000057 NA coding upstream 392284 4901460 ~ 5030155 (+)
XLOC_000056 FO744838.1 coding upstream 741962 4598060 ~ 4680477 (+)
XLOC_000062 atic coding downstream 3129 5437390 ~ 5504130 (+)
XLOC_000063 cpo coding downstream 141890 5576151 ~ 5587575 (+)
XLOC_000064 NA coding downstream 272709 5706970 ~ 5728684 (+)
XLOC_000065 NA coding downstream 360752 5795013 ~ 5799092 (+)
XLOC_000066 abcb6a coding downstream 700915 6135176 ~ 6158609 (+)
XLOC_000054 CABZ01063288.1 non-coding upstream 1662405 3759924 ~ 3760034 (+)
XLOC_000053 NA non-coding upstream 1701836 3718666 ~ 3720603 (+)
XLOC_000072 NA non-coding downstream 945617 6379878 ~ 6554470 (+)
XLOC_000073 NA non-coding downstream 963949 6398210 ~ 6403223 (+)
XLOC_000076 NA non-coding downstream 1230772 6665033 ~ 6668339 (+)

Expression


Co-expression Network