Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013401 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30345321 ~ 30351835 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0051726 | regulation of cell cycle | biological_process |
| GO:0048592 | eye morphogenesis | biological_process |
| GO:0051301 | cell division | biological_process |
| GO:0005768 | endosome | cellular_component |
| GO:0031410 | cytoplasmic vesicle | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0031267 | small GTPase binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013401 | True | 483 | mRNA | 0.63 | 3 | 30345321 | 30351835 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013402 | NA | coding | upstream | 28902 | 30311722 ~ 30316419 (+) |
| AMCG00013400 | LOC108248236 | coding | upstream | 34530 | 30302820 ~ 30310791 (+) |
| AMCG00013395 | NA | coding | upstream | 61765 | 30279191 ~ 30283556 (+) |
| AMCG00013394 | NA | coding | upstream | 81380 | 30256283 ~ 30263941 (+) |
| AMCG00013398 | NA | coding | upstream | 128297 | 30208073 ~ 30217024 (+) |
| AMCG00013406 | rab11fip4a,LOC107654480,LOC108274243,LOC106564646,LOC107688103 | coding | downstream | 14037 | 30365872 ~ 30390476 (+) |
| AMCG00013407 | NA | coding | downstream | 87839 | 30439674 ~ 30452954 (+) |
| AMCG00013418 | NA | coding | downstream | 174020 | 30525855 ~ 30534025 (+) |
| AMCG00013415 | arhgdia,LOC107654583 | coding | downstream | 184968 | 30536803 ~ 30541363 (+) |
| AMCG00013414 | p4hb,LOC107591928 | coding | downstream | 195808 | 30547643 ~ 30557225 (+) |
| G43895 | NA | non-coding | upstream | 898623 | 29434050 ~ 29446698 (+) |
| G43855 | NA | non-coding | upstream | 1142600 | 29179098 ~ 29202721 (+) |
| G43853 | NA | non-coding | upstream | 1167055 | 29177051 ~ 29178266 (+) |
| G43799 | NA | non-coding | upstream | 1186828 | 29156699 ~ 29158493 (+) |
| G43810 | NA | non-coding | upstream | 1193987 | 29149978 ~ 29151334 (+) |
| G44182 | NA | non-coding | downstream | 103837 | 30455672 ~ 30457671 (+) |
| G44306 | NA | non-coding | downstream | 382701 | 30734536 ~ 30734795 (+) |
| G44307 | NA | non-coding | downstream | 384974 | 30736809 ~ 30737487 (+) |
| G44322 | NA | non-coding | downstream | 420546 | 30772381 ~ 30774068 (+) |
| G44323 | NA | non-coding | downstream | 422347 | 30774182 ~ 30774548 (+) |
| AMCG00013399 | NA | other | upstream | 1316 | 30339802 ~ 30344005 (+) |
| AMCG00013396 | tbc1d16,LOC106597465,LOC106606686 | other | upstream | 116300 | 30218910 ~ 30229021 (+) |
| AMCG00013388 | NA | other | upstream | 255204 | 30083644 ~ 30090117 (+) |
| AMCG00013382 | NA | other | upstream | 270573 | 30063380 ~ 30074748 (+) |
| AMCG00013375 | bptf,LOC105013188,LOC106607015,LOC103359999 | other | upstream | 416624 | 29885762 ~ 29928697 (+) |
| AMCG00013408 | NA | other | downstream | 73172 | 30425007 ~ 30430649 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | downstream | 138992 | 30490827 ~ 30496613 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | downstream | 211405 | 30563240 ~ 30568219 (+) |
| G44325 | NA | other | downstream | 425016 | 30776851 ~ 30777169 (+) |
| AMCG00013468 | NA | other | downstream | 1549695 | 31901530 ~ 31911801 (+) |
