AMCG00013402


Basic Information

Item Value
gene id AMCG00013402
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30311722 ~ 30316419 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013402
ATGGACCTCAGAGTGAGCGGCCCGCTTGTGCTGCTCCTGCCCCTGCTGGGGCTGTGCGCCGCCGACCTGTGCAACTGGAGAGGCAGCGGTCTGGCGCGGGAGCCTCACTCCCGCACGGTGCAGCAGGTTCGTCTGCGCTGCACGGAGGGGCAGGTGGAGTGGTTCTACCCCAGCCAGGCCCTGCGGGTGCTGCTGCAGCCCAACCTGGCGTCGGCCCGGCCCGCCACCGTGTGCATCAAGCCCCTGCGCAGCTTCCGCGGTGCCAGTGTGTTCATCGAGCGTGCCGGggagctggagctgctgctggccGAGGGCGGGCTGCCGGAGCAGGTGTACTGTTTCCGCACTGCCAGCCCCCAGCAGCCTGCCGCCGTCTTCCTGCAGGCGAGTCCCCACAGTGACATCAGCCGGCGCACCGTGGGCTTCCGCTACGAGCTGCTGGGCCACCATGGCGCCCAGCCCGACCTCCGGGCCACCGTAGTGCAGGccGTGTGCCGCCCGTGCAATGACACAGAGCTGCTCCTGGCCGTTTGCAGCTCGGACTTCGTGGTGAGGGGCTCAATCCAGGCGGTGTCTCATGACGAGGAGCGGCAGACATCGCGCCTGGAGGTGGGCTCCGGCCACGTGTACCGGCAGCGCAGTGGTGTGTTCGAGCGGGATGGTGCAGGGGGGTCAGGGGGGGCCTGGAAGGGTTACATCCATACCCTGCTGCAGTGCGGCGTGAGGCAGGGGGACGGGGAGTTCCTCTTCATGGGGGCGGAGCACTTCGGGGAGGCGTGGCTGGGTTGTGCGCCACGGTACAAAGACTTCCTGTCTGTGTATGGTGTCGCCCGGGCGGCCCGTGAGAACCCCTGCGAGTTCCCTCTAGattga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013402 True 873 mRNA 0.69 4 30311722 30316419

Neighbor

gene id symbol gene type direction distance location
AMCG00013400 LOC108248236 coding upstream 931 30302820 ~ 30310791 (+)
AMCG00013395 NA coding upstream 28166 30279191 ~ 30283556 (+)
AMCG00013394 NA coding upstream 47781 30256283 ~ 30263941 (+)
AMCG00013398 NA coding upstream 94698 30208073 ~ 30217024 (+)
AMCG00013397 NA coding upstream 117559 30186840 ~ 30194163 (+)
AMCG00013401 NA coding downstream 28902 30345321 ~ 30351835 (+)
AMCG00013406 rab11fip4a,LOC107654480,LOC108274243,LOC106564646,LOC107688103 coding downstream 49453 30365872 ~ 30390476 (+)
AMCG00013407 NA coding downstream 123255 30439674 ~ 30452954 (+)
AMCG00013418 NA coding downstream 209436 30525855 ~ 30534025 (+)
AMCG00013415 arhgdia,LOC107654583 coding downstream 220384 30536803 ~ 30541363 (+)
G43895 NA non-coding upstream 865024 29434050 ~ 29446698 (+)
G43855 NA non-coding upstream 1109001 29179098 ~ 29202721 (+)
G43853 NA non-coding upstream 1133456 29177051 ~ 29178266 (+)
G43799 NA non-coding upstream 1153229 29156699 ~ 29158493 (+)
G43810 NA non-coding upstream 1160388 29149978 ~ 29151334 (+)
G44182 NA non-coding downstream 139253 30455672 ~ 30457671 (+)
G44306 NA non-coding downstream 418117 30734536 ~ 30734795 (+)
G44307 NA non-coding downstream 420390 30736809 ~ 30737487 (+)
G44322 NA non-coding downstream 455962 30772381 ~ 30774068 (+)
G44323 NA non-coding downstream 457763 30774182 ~ 30774548 (+)
AMCG00013396 tbc1d16,LOC106597465,LOC106606686 other upstream 82701 30218910 ~ 30229021 (+)
AMCG00013388 NA other upstream 221605 30083644 ~ 30090117 (+)
AMCG00013382 NA other upstream 236974 30063380 ~ 30074748 (+)
AMCG00013375 bptf,LOC105013188,LOC106607015,LOC103359999 other upstream 383025 29885762 ~ 29928697 (+)
AMCG00013364 cacng5,cacng5b,LOC107586339,LOC107569463,LOC107716884,LOC107688812,LOC107710162,LOC108437158,LOC107710696,LOC107698772 other upstream 644671 29640623 ~ 29667051 (+)
AMCG00013399 NA other downstream 23383 30339802 ~ 30344005 (+)
AMCG00013408 NA other downstream 108588 30425007 ~ 30430649 (+)
AMCG00013416 alyref,LOC106606979 other downstream 174408 30490827 ~ 30496613 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other downstream 246821 30563240 ~ 30568219 (+)
G44325 NA other downstream 460432 30776851 ~ 30777169 (+)

Expression


Co-expression Network