AMCG00013403


Basic Information

Item Value
gene id AMCG00013403
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30333448 ~ 30340461 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013403
GGCCCAGTGACGAGTTAACCCGTTCACAAGCATGAGAGATTGACGTACGGGCCTGGTTGCCCAGCGCAAACCACATTCAAATTCCAACATGGGGTCCAGAATGTGGTTTTGGCACGGAAGGACGGGGCGTGCGGCAGCAGGGGGAAGTTTAAACTGCGGTTCTGGCACTAACACCAGGACGGTTTTATAGTTATGGCACATATTGTTCGGCAATCGGACAGAGAGATCAGCTGACTTGCACTGTCATATGACTGTGGCTGACTGTGTGCCCAGATTGCCACTGCGATGATGGAGGGACACAAGATCACCGGgcttctgctgctgctcctggcCATTGATGCAGgtGGTGCGGTGCCAAGAGAAGGGAAGGAGACTTGGGGCTATGTGGATGTACGGGATGGCGCTCACATGTTCTGGTGGCTGTACTACACTACCAACCCCACCCACAACTACACTCAAGTGCCCCTGGTTATGTGGCTGCAGGGCGGCCCGGGCGGCTCCGGCTGCGGGTTTGGGAACTTCGAGGAGATCGGGCCGCTGGACCGGGACCTGAAGCCCAGAAACACGACCTGGACCTTCTTCAAGTCTCATATGGAGTTCCAGGCGATCGGCGAGGGCTCCATCAGATGCAAGTTCGCGGGCGTGGCTCTGGGCGACTCCTGGATCTCCCCGCTGGATTCTGTCATGTCCTGGGGGCCATACCTGTACAGCACGTCTCTGCTGGACGACCGTGGCCTGGCGGAGGTGGACGGCGCGGCGCGGGCGGTGCAGCAGGCCGTGCAGCACGGGGAGTTTGAGAAGGCCACGGAGCTGTGGTCCAACACAGAGAACGTGGTGGAGCAGAACACCAATTTTGTGAACTTCTACAACATCCTGACCCAGGACCCTGACAACACGGCCAAGATGGTGGCCGGAGATGGACACCTTGCCTCCCTGCTGCGCCGACATGTGCGCCCCCTGCACAAGCAGTCACTCAGCCAGCTAATGAACGGCCCCATCAGGGACAAGCTGAAGGTCATCCCCCACGACGTCACCTGGGGAGGCCAGTCTGCAGAGGTGTTCTCCAGCATGGCTGGGGACTTCATGAAGCCAGTGGTGGACACTGTGGACCAGCTGCTGGCGGCCGGAGTCAACGTGACGGTCTACAACGGACAGCTGGACCTGATCGTGGACACGATGGGTCAGGAGGCCTGGGTCAAGAGGCTGAAGTGGGCGGGACTTCCTGATTTTAACAAGCTGAGATGGACAGCCCTGGACGACCCCACCTCCCCGGGCCAGACCGGTGCATTCTACAAGGTCTACCAGAACTTCGCCTTCTACTGGATCCTCAAGGCTGGCCACATGATCCCCTCGGACCAGGGAGAGATGGCTCTGGAGATGCTGAGGATGGTGACCAGGCAGGAGTGACCGGGTCAGAGGTCAGCTGGGATGACCCTGCAGCCAGAAGACAATCACCCCCACAGCCTCCCCTTCCCCAATCCAATCAGCACCGCGCACACCTCCGCCCCACACCGCCGCCTGCAGACCGGCCCGCAGGGATCACGGGCGAACTGTGTCTGGGTGGTCAGCTAGTAATGTCTGCTGTTTCACGTGTGAACCAATCAAAGCCTGTTTTGAGaacaagtttattttgataatctgtgatttgtgttaaaaatactgaca

Function

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K09646 SCPEP1; serine carboxypeptidase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013403 True 1665 mRNA 0.59 12 30333448 30340461

Neighbor

gene id symbol gene type direction distance location
AMCG00013404 NA coding downstream 748 30322265 ~ 30332700 (-)
AMCG00013392 NA coding downstream 168970 30155262 ~ 30164478 (-)
AMCG00013393 rhot1a,LOC108430568,LOC107729179 coding downstream 180090 30126697 ~ 30153358 (-)
AMCG00013391 NA coding downstream 206947 30117800 ~ 30126501 (-)
AMCG00013389 rhbdl3 coding downstream 232744 30091862 ~ 30100704 (-)
AMCG00013410 NA coding upstream 90203 30430664 ~ 30436741 (-)
AMCG00013419 NA coding upstream 167490 30507951 ~ 30521671 (-)
AMCG00013420 NA coding upstream 183446 30523907 ~ 30533879 (-)
AMCG00013421 NA coding upstream 283515 30623976 ~ 30635826 (-)
AMCG00013430 LOC104954087 coding upstream 352614 30693075 ~ 30697703 (-)
G44230 NA non-coding downstream 22682 30307026 ~ 30310766 (-)
G44086 NA non-coding downstream 243301 30088803 ~ 30090147 (-)
G43919 NA non-coding downstream 833875 29497710 ~ 29499573 (-)
G43831 NA non-coding downstream 1212129 29119373 ~ 29121319 (-)
G43834 znf207,LOC107753267 non-coding downstream 1215487 29115222 ~ 29117961 (-)
G44213 NA non-coding upstream 44225 30384686 ~ 30455606 (-)
G44261 NA non-coding upstream 193510 30533971 ~ 30539317 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding upstream 199852 30540313 ~ 30562691 (-)
G44264 NA non-coding upstream 210928 30551389 ~ 30552050 (-)
G44259 p4hb,LOC107591928 non-coding upstream 213320 30553781 ~ 30599051 (-)
AMCG00013405 NA other downstream 42581 30286642 ~ 30290867 (-)
AMCG00013390 NA other downstream 149024 30165817 ~ 30184424 (-)
AMCG00013386 NA other downstream 250007 30080614 ~ 30083441 (-)
AMCG00013384 NA other downstream 271814 30040205 ~ 30061634 (-)
G44034 ddx5,kpna2,LOC102776273,LOC103469782,LOC108432045,LOC108261381,LOC100304957 other downstream 305218 29926383 ~ 30028230 (-)
G44243 NA other upstream 59426 30399887 ~ 30423025 (-)
AMCG00013409 LOC107590438 other upstream 115266 30455727 ~ 30464091 (-)
AMCG00013412 NA other upstream 128169 30468630 ~ 30482326 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other upstream 142844 30483305 ~ 30486331 (-)
AMCG00013425 NA other upstream 389826 30730287 ~ 30742643 (-)

Expression


Co-expression Network