AMCG00013418


Basic Information

Item Value
gene id AMCG00013418
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30525855 ~ 30534025 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013418
ATGAAGGCCTGCAGCTGGGTGCCCTCCTCAGGGGCGATCGGTGCATCGCTGGCGATGTTCAGGAAGATCAGGATTCCTTCCGAAGCGGTTATGCTTCTTGGCATGCCGAAGAAGCCCTCTCCTGATTGCACAAAGACACAGGATCTCTCCAATGCCAATGAAAATGCCAGACAGCCTGATCAGACCCTTGGCATCATCACAAAAGCGGGTCATGGTGCCAATGCAGGTGCCATAGACACCACTGTAGAACGTCAGTTCCAGGCCTGTAGGGCCGACGTGCGCGTCGCCGCTCCCGGAAGCGTGTCGTGCGGGCGGCTCCGCTCCCTGATCGCCATTCTTGCCCGGTCGAGCGGAGCAGCTGAGGCACGCAGACATCACGGTGAACCGCGCTACAAGAGGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013418 True 402 mRNA 0.59 4 30525855 30534025

Neighbor

gene id symbol gene type direction distance location
AMCG00013407 NA coding upstream 72901 30439674 ~ 30452954 (+)
AMCG00013406 rab11fip4a,LOC107654480,LOC108274243,LOC106564646,LOC107688103 coding upstream 135379 30365872 ~ 30390476 (+)
AMCG00013401 NA coding upstream 174020 30345321 ~ 30351835 (+)
AMCG00013402 NA coding upstream 209436 30311722 ~ 30316419 (+)
AMCG00013400 LOC108248236 coding upstream 215064 30302820 ~ 30310791 (+)
AMCG00013415 arhgdia,LOC107654583 coding downstream 2778 30536803 ~ 30541363 (+)
AMCG00013414 p4hb,LOC107591928 coding downstream 13618 30547643 ~ 30557225 (+)
AMCG00013413 ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 coding downstream 26456 30560481 ~ 30562562 (+)
AMCG00013424 NA coding downstream 173760 30707785 ~ 30711079 (+)
AMCG00013423 NA coding downstream 193060 30727085 ~ 30729235 (+)
G44182 NA non-coding upstream 68184 30455672 ~ 30457671 (+)
G43895 NA non-coding upstream 1079157 29434050 ~ 29446698 (+)
G43855 NA non-coding upstream 1323134 29179098 ~ 29202721 (+)
G43853 NA non-coding upstream 1347589 29177051 ~ 29178266 (+)
G43799 NA non-coding upstream 1367362 29156699 ~ 29158493 (+)
G44306 NA non-coding downstream 200511 30734536 ~ 30734795 (+)
G44307 NA non-coding downstream 202784 30736809 ~ 30737487 (+)
G44322 NA non-coding downstream 238356 30772381 ~ 30774068 (+)
G44323 NA non-coding downstream 240157 30774182 ~ 30774548 (+)
G44379 NA non-coding downstream 388721 30922746 ~ 30934437 (+)
AMCG00013416 alyref,LOC106606979 other upstream 29242 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 95206 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 181850 30339802 ~ 30344005 (+)
AMCG00013396 tbc1d16,LOC106597465,LOC106606686 other upstream 296834 30218910 ~ 30229021 (+)
AMCG00013388 NA other upstream 435738 30083644 ~ 30090117 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other downstream 29215 30563240 ~ 30568219 (+)
G44325 NA other downstream 242826 30776851 ~ 30777169 (+)
AMCG00013468 NA other downstream 1367505 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 1739243 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 1859793 32393818 ~ 32400452 (+)

Expression


Co-expression Network