Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013423 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30727085 ~ 30729235 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0030123 | AP-3 adaptor complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013423 | True | 507 | mRNA | 0.63 | 4 | 30727085 | 30729235 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013424 | NA | coding | upstream | 16006 | 30707785 ~ 30711079 (+) |
| AMCG00013413 | ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 | coding | upstream | 164523 | 30560481 ~ 30562562 (+) |
| AMCG00013414 | p4hb,LOC107591928 | coding | upstream | 169860 | 30547643 ~ 30557225 (+) |
| AMCG00013415 | arhgdia,LOC107654583 | coding | upstream | 185722 | 30536803 ~ 30541363 (+) |
| AMCG00013418 | NA | coding | upstream | 193060 | 30525855 ~ 30534025 (+) |
| AMCG00013422 | NA | coding | downstream | 41028 | 30770263 ~ 30772373 (+) |
| AMCG00013437 | NA | coding | downstream | 130489 | 30859724 ~ 30871739 (+) |
| AMCG00013438 | NA | coding | downstream | 164197 | 30893432 ~ 30895656 (+) |
| AMCG00013439 | NA | coding | downstream | 177611 | 30906846 ~ 30907997 (+) |
| AMCG00013440 | NA | coding | downstream | 210845 | 30940080 ~ 30949350 (+) |
| G44182 | NA | non-coding | upstream | 269414 | 30455672 ~ 30457671 (+) |
| G43895 | NA | non-coding | upstream | 1280387 | 29434050 ~ 29446698 (+) |
| G43855 | NA | non-coding | upstream | 1524364 | 29179098 ~ 29202721 (+) |
| G43853 | NA | non-coding | upstream | 1548819 | 29177051 ~ 29178266 (+) |
| G43799 | NA | non-coding | upstream | 1568592 | 29156699 ~ 29158493 (+) |
| G44306 | NA | non-coding | downstream | 5301 | 30734536 ~ 30734795 (+) |
| G44307 | NA | non-coding | downstream | 7574 | 30736809 ~ 30737487 (+) |
| G44322 | NA | non-coding | downstream | 43146 | 30772381 ~ 30774068 (+) |
| G44323 | NA | non-coding | downstream | 44947 | 30774182 ~ 30774548 (+) |
| G44379 | NA | non-coding | downstream | 193511 | 30922746 ~ 30934437 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | upstream | 158866 | 30563240 ~ 30568219 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | upstream | 230472 | 30490827 ~ 30496613 (+) |
| AMCG00013408 | NA | other | upstream | 296436 | 30425007 ~ 30430649 (+) |
| AMCG00013399 | NA | other | upstream | 383080 | 30339802 ~ 30344005 (+) |
| AMCG00013396 | tbc1d16,LOC106597465,LOC106606686 | other | upstream | 498064 | 30218910 ~ 30229021 (+) |
| G44325 | NA | other | downstream | 47616 | 30776851 ~ 30777169 (+) |
| AMCG00013468 | NA | other | downstream | 1172295 | 31901530 ~ 31911801 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | downstream | 1544033 | 32273268 ~ 32284951 (+) |
| AMCG00013477 | ppp1r37 | other | downstream | 1664583 | 32393818 ~ 32400452 (+) |
| AMCG00013478 | NA | other | downstream | 1694041 | 32423276 ~ 32455686 (+) |
