Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013427 |
| gene name | mrpl12,LOC106606250 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 30702766 ~ 30705013 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| symbol | description |
|---|---|
| mrpl12 | Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial transcription. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Is expressed in several structures, including alar plate midbrain region; digestive system; optic tectum; optic vesicle; and pectoral fin. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 45. Orthologous to human MRPL12 (mitochondrial ribosomal protein L12). |
| description |
|---|
| PREDICTED: 39S ribosomal protein L12, mitochondrial |
| id | description |
|---|---|
| K02935 | RP-L7, MRPL12, rplL; large subunit ribosomal protein L7/L12 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013427 | True | 996 | mRNA | 0.61 | 5 | 30702766 | 30705013 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013432 | NA | coding | downstream | 2101 | 30698240 ~ 30700665 (-) |
| AMCG00013430 | LOC104954087 | coding | downstream | 5063 | 30693075 ~ 30697703 (-) |
| AMCG00013421 | NA | coding | downstream | 66940 | 30623976 ~ 30635826 (-) |
| AMCG00013420 | NA | coding | downstream | 168887 | 30523907 ~ 30533879 (-) |
| AMCG00013419 | NA | coding | downstream | 181095 | 30507951 ~ 30521671 (-) |
| AMCG00013426 | hgs | coding | upstream | 6496 | 30711509 ~ 30723530 (-) |
| AMCG00013428 | NA | coding | upstream | 44770 | 30749783 ~ 30760059 (-) |
| AMCG00013431 | NA | coding | upstream | 55590 | 30760603 ~ 30761570 (-) |
| AMCG00013429 | NA | coding | upstream | 69269 | 30774282 ~ 30778472 (-) |
| AMCG00013434 | NA | coding | upstream | 86441 | 30791454 ~ 30801211 (-) |
| G44259 | p4hb,LOC107591928 | non-coding | downstream | 103715 | 30553781 ~ 30599051 (-) |
| G44256 | arhgdia,LOC107665665,LOC107654583 | non-coding | downstream | 140075 | 30540313 ~ 30562691 (-) |
| G44264 | NA | non-coding | downstream | 150716 | 30551389 ~ 30552050 (-) |
| G44261 | NA | non-coding | downstream | 163449 | 30533971 ~ 30539317 (-) |
| G44213 | NA | non-coding | downstream | 247160 | 30384686 ~ 30455606 (-) |
| G44330 | NA | non-coding | upstream | 67529 | 30772542 ~ 30774110 (-) |
| G44381 | NA | non-coding | upstream | 220473 | 30925486 ~ 30931267 (-) |
| G44382 | NA | non-coding | upstream | 226747 | 30931760 ~ 30935200 (-) |
| G44384 | NA | non-coding | upstream | 232612 | 30937625 ~ 30937857 (-) |
| G44420 | NA | non-coding | upstream | 341712 | 31046725 ~ 31047119 (-) |
| AMCG00013411 | anapc11,LOC107553313,LOC106564932 | other | downstream | 216435 | 30483305 ~ 30486331 (-) |
| AMCG00013412 | NA | other | downstream | 220440 | 30468630 ~ 30482326 (-) |
| AMCG00013409 | LOC107590438 | other | downstream | 238675 | 30455727 ~ 30464091 (-) |
| G44243 | NA | other | downstream | 279741 | 30399887 ~ 30423025 (-) |
| AMCG00013405 | NA | other | downstream | 411899 | 30286642 ~ 30290867 (-) |
| AMCG00013425 | NA | other | upstream | 25274 | 30730287 ~ 30742643 (-) |
| G44719 | NA | other | upstream | 1860747 | 32565760 ~ 32567952 (-) |
| AMCG00013488 | NA | other | upstream | 1917140 | 32622153 ~ 32627904 (-) |
| AMCG00013518 | NA | other | upstream | 2763836 | 33468849 ~ 33501747 (-) |
| G45037 | NA | other | upstream | 2973211 | 33678224 ~ 33678907 (-) |
