AMCG00013433


Basic Information

Item Value
gene id AMCG00013433
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30816609 ~ 30820190 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013433
CCCACTTACTGCTCTGGATCATCCCTGGCCCTGCAGCCCAGGCCCAGATGTTTCCTCAGAGGAGGTCAGGCTGAGGAGAGCGATGGGGAGAGCGGAAGCTATTCGAGGCACGGAGGCTCTCCAGCGCCAGAGGTCTCTGCAGCCCGTTCCCCGAGCCAGATCCGCTGGATTTACACTGATTTATGGAGGACGAGTCTCCAGTGGGATAACTGGCATTCACATTCCTATTTGGCTTCTTCTGTCGATGCGAAGGAACTGTGGCCCCATCAGTAACGGGGAGAACCGCGTTACACAACAGCCTTTCAAAGAGGTTTATTGTTTCATAAGCGTTATTAATGTGTGAACACGCACTGCCCAGGCCGGCCTGTTCGCTGGCCCGATGCCACACTGAGACAGAGGTTTCTCCACAGAGTGATGCATTGCTCTCGATGCATATTAACTGGactggaaaatggaaaatggagcCAGAGCACCACTAGTCTGTAACTCCATCAATAGGACATCCCTGGGAACAGAAGTCTTTGGGTTCAAACAAGTCTTTAACAATATAATTGGTGTAGATGTCTCATAATCGAACCGTGAAGCATCTGGTTGAGCTGCAGTCCTGCAATTCCAGACTCACCCCACTGTAGATCCTGCCTGCTATGAAAGAGAGAAGCTCCTCGGGGTCTGAGGCTCATCCATCAAGTGAAAGCAGTTGAAGCTGCGCACCATATCTGGTCCTCTTCTATGCCGAGCTCCCGCTGAGCGCGGGCAGCGCTGGTGGGAGACGGCACTGTGCTCTGATTTAAACAAGTCTTCGATTCACACTGACAGAGTGGCACGTTTAAGATTGATGAGCATTCCGGTTATTTTTAGTGCAAGCTCGACACACGCGTCCGAGCCAGATGCCTCACGGACAAGCCTGGAAGACTTGGAGACtcagagtgaaaatgggataaGTTTCACCTGAGATTCAGGGGCAGAAAACCTTTGATCTGGAATTACCTCAGCGGAAAAAGACAAAGACGTCTTTGTGAGTGCTGGGTTTCAAGCACCAAAAATCTTATTGCATTACTAACCCATGGAGGGGCTGAGATTGAGTTAATCAGACTGCGAACGCTGGCTGAATCGTGGGCTTTGTTAGAAAGTCTTTCCCCCGATTTTGCCCGTGTGCTGCGGAACAGCCCACACTGAAGCCGGCTTTGTCCGTGGGGGAAGCGAGCAGCGGCGCAGATTTGCCATTTCCAAAGCTGCTTAACTCCTTGCATGTGATATCACAGGAAACACTGCGAGGGGAACCAAGGCTCCCGCTGTCCAGCTTTCTGTGGCAGAGGTCCTGTTGGGAATGTGGAGGGATGGGGGGGAGACCTGTCGGAACACCGATCTAACCAGCCAGGGCAGCCCGTCCACACTTACtatacacactctcacacacacacacacacactcactacacacatttaacacaccaggggagggagagggagagcgcaGTGTAATCACCCTGAAATCGGCACACTGAgctgagtgagtgtgtgtattgaGTGACTGTGagtgtgtagtttgtgtgtattgagtgtgagtgtgtgtgtagtcagTGTATGTtttgagtgtgagtgtgtatgtattgagtgtgagtgtgtagtaTGTAGGGGGTCGGTCCTGTCTGATGGCACAAGCCTGCACACGCACCCTTTACTCCCAGCCTCTTTCCCACCATTAAGGGCTTCTCCTGCTCCATCAGGGAGAGAAGGTGTGGCAGCAGGAAACGGCCGGTGCGCTGACAGGTGGATGGTGCCGGAGCCCCAGCTCTTCATGTCCCGTCTTGAAGGGGAGCCTCGCCTTGACCTTACGCCTTGCTTCTCCTGCGTGGGGCGGCTTGATTGCAAAGTGCACGCCTGTCAAGAGTCACCAGGGATCCGTGCTGAGGACACGCTTGTGTTCATACTGCTGCCCAGACACACGGACCGAGCGGAGCTGCCCAGACATACGGACAGAACGGTGTACACCTCCCACGGGCCCACGGTCATCATGCCCACCTGGTTCTGTGGCCGCAGCTGGTTCGAGCACGTCGGAAAGTTTGACGAGGGCGGAAGGGGCGTGCCGGAGGACCTGCTGTTCTTCTACGCCAGCCTGCGGAGAGGGGTTGGACTGCTGCGGCTGGACCACTGCCTGCTGACATACCGACACCATCCGCAAGCTGCCAGCCTGGCCGTGCACGAGTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013433 True 2208 mRNA 0.54 4 30816609 30820190

Neighbor

gene id symbol gene type direction distance location
AMCG00013436 NA coding downstream 8063 30803543 ~ 30808546 (-)
AMCG00013434 NA coding downstream 15398 30791454 ~ 30801211 (-)
AMCG00013429 NA coding downstream 38137 30774282 ~ 30778472 (-)
AMCG00013431 NA coding downstream 55039 30760603 ~ 30761570 (-)
AMCG00013428 NA coding downstream 56550 30749783 ~ 30760059 (-)
AMCG00013435 NA coding upstream 29931 30850121 ~ 30856115 (-)
AMCG00013444 tbcd coding upstream 51712 30871902 ~ 30888190 (-)
AMCG00013441 NA coding upstream 76546 30896736 ~ 30905263 (-)
AMCG00013443 NA coding upstream 90754 30910944 ~ 30912812 (-)
AMCG00013442 NA coding upstream 94532 30914722 ~ 30938171 (-)
G44330 NA non-coding downstream 42499 30772542 ~ 30774110 (-)
G44259 p4hb,LOC107591928 non-coding downstream 217558 30553781 ~ 30599051 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding downstream 253918 30540313 ~ 30562691 (-)
G44264 NA non-coding downstream 264559 30551389 ~ 30552050 (-)
G44261 NA non-coding downstream 277292 30533971 ~ 30539317 (-)
G44381 NA non-coding upstream 105296 30925486 ~ 30931267 (-)
G44382 NA non-coding upstream 111570 30931760 ~ 30935200 (-)
G44384 NA non-coding upstream 117435 30937625 ~ 30937857 (-)
G44420 NA non-coding upstream 226535 31046725 ~ 31047119 (-)
G44469 NA non-coding upstream 483339 31303529 ~ 31310495 (-)
AMCG00013425 NA other downstream 73966 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 330278 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 334283 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 352518 30455727 ~ 30464091 (-)
G44243 NA other downstream 393584 30399887 ~ 30423025 (-)
G44719 NA other upstream 1745570 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 1801963 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2648659 33468849 ~ 33501747 (-)
G45037 NA other upstream 2858034 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 2872654 33692844 ~ 33699712 (-)

Expression


Co-expression Network