AMCG00013434


Basic Information

Item Value
gene id AMCG00013434
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30791454 ~ 30801211 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013434
CGCTGCGTCAGCTGGCCGGGAGGCGGTGTGTGCGCGCAGGGCAGCCGCGGAGCGCAGTGGAGACTCGGCGGCTCACGGAGCAACATGTAGCGCCGGGCGGGACGAGCTCTGACTTACTGCGCCGGGATTTGTGTTTTCTGGACAGAGAAGAGCCCGAGCAGCGCGTCGCCATGCGGCCCGAGCGCACCCCGTACCTGCTgccgccgctgctgctgctgctgctccggGCGGCCGCCTCGCAGTACTCCAGCGACCAGTGCAGCTGGAGGGGCAGcGGGCTGACGCACGAGGCGCACGCACGGGACGTGGAGCAGGTTTATCTGCGCTGCTCGCAGGGGGCGCTGGAGTGGCTGTACCCAACGGGGGCGCTGATCGTCAACCTGCGGCCCAACATCCTGTCCCCTGCTGCCCAGCGCCTGGCGGTCTGCATCAAGCCGTCCGGCGAGTCCCGCGGCGCCAACATCTACCTGGAGAAAGCGGGGCGACTGCAGCTGCTGTTGCGAGAGGAGGAGCAGCCAGCGGGGCAGGTGCACTGCTTCGGCATAGAGGAGGGCAGCCTGTTCATCGAGGCCACGCCCCGGCAGGACATCAGCCGCAAGATCACCGCATTTCAGTACGAGCTGGTCAACCACCGTCCTGGCGCCGACCCCAGCACTGCTCCCTGCCAGCCCTGCAGTGACTCGGAGGTGCTCCTGGCGGTTTGCTCGAGTGATTTTGtgGCGCGGGGCAGCATTGTGGGCGTGCAGGACGAGGCGGAGCAGCACGAGTCGGTGATCTCAGTGTCGCTCAGCCGCCTCATCCGGCAGAAGAGCCGTGTGTTCGTGCCGGCAGGAGGGCGGGCACCACATTGGCGGGGGCAGATGCGCACACCTCTGGAGTGTGGCGTGAAGCCAGGTGACGGGGACTTCCTGTTCACCGGGGCAGTGCGCTTCGGCGAGGCGTGGCTGGGGTGCGCGCCGCGATTCAAGGACTTCCTGCGGCTGTACGGCGAGGCGCTGGACCGAGGCACCAACCCCTGCCACATCGACACCGCCTGACCCGCACGGCGCCCCCCAATCAGCACTTTCCCCTCAGGCTCGGCCGGGGCCCCAGGCCAGGGCTTGGATggacggacggacagacagagagtCTCCTCACAGCCCGACGCACGCGGCCCTGCCCGGCCCACCCCCAGCCAGCGATGGAGGTACCAGCTCTCGTGGTTGCCAAGCAACACCACTGGACCGAGACTGCTTTTACAGCCACCTTTTCTTTTGGAGACGAAATTCTTAAAACGTCTTAAAAATCCTGAAAGTCCTCCTGCTGCGGAGCGACGTCTCGAAGGCAGCGGACCATGGCGGTGGCCGGCAGCGCTCCTGTAAATCGCAGTGAATGTGAAAGACATGACAAAGTGCTTTGTAAAAAGCTTGATGTACAGTTTGAAGTTGTTTCTTATGACAGAAATGTATGAAGCTAAACCTGCTCTGTTGCTGTATTGTTATGAATTGTGCAATTTCAGCCTGGGATTTTTCAGGCTGATAAATTGTAAAGACTTTAATTCCAGAGAATAAAGACTTCCTGGAGGAAACAAACAGCTCATCTCTCCCCagtgtctccctctccctctccatctgtATTGTTTCACCTCGTTTCCCG

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013434 True 1635 mRNA 0.62 4 30791454 30801211

Neighbor

gene id symbol gene type direction distance location
AMCG00013429 NA coding downstream 12982 30774282 ~ 30778472 (-)
AMCG00013431 NA coding downstream 29884 30760603 ~ 30761570 (-)
AMCG00013428 NA coding downstream 31395 30749783 ~ 30760059 (-)
AMCG00013426 hgs coding downstream 67924 30711509 ~ 30723530 (-)
AMCG00013427 mrpl12,LOC106606250 coding downstream 86441 30702766 ~ 30705013 (-)
AMCG00013436 NA coding upstream 2332 30803543 ~ 30808546 (-)
AMCG00013433 NA coding upstream 15398 30816609 ~ 30820190 (-)
AMCG00013435 NA coding upstream 48910 30850121 ~ 30856115 (-)
AMCG00013444 tbcd coding upstream 70691 30871902 ~ 30888190 (-)
AMCG00013441 NA coding upstream 95525 30896736 ~ 30905263 (-)
G44330 NA non-coding downstream 17344 30772542 ~ 30774110 (-)
G44259 p4hb,LOC107591928 non-coding downstream 192403 30553781 ~ 30599051 (-)
G44256 arhgdia,LOC107665665,LOC107654583 non-coding downstream 228763 30540313 ~ 30562691 (-)
G44264 NA non-coding downstream 239404 30551389 ~ 30552050 (-)
G44261 NA non-coding downstream 252137 30533971 ~ 30539317 (-)
G44381 NA non-coding upstream 124275 30925486 ~ 30931267 (-)
G44382 NA non-coding upstream 130549 30931760 ~ 30935200 (-)
G44384 NA non-coding upstream 136414 30937625 ~ 30937857 (-)
G44420 NA non-coding upstream 245514 31046725 ~ 31047119 (-)
G44469 NA non-coding upstream 502318 31303529 ~ 31310495 (-)
AMCG00013425 NA other downstream 48811 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 305123 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 309128 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 327363 30455727 ~ 30464091 (-)
G44243 NA other downstream 368429 30399887 ~ 30423025 (-)
G44719 NA other upstream 1764549 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 1820942 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2667638 33468849 ~ 33501747 (-)
G45037 NA other upstream 2877013 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 2891633 33692844 ~ 33699712 (-)

Expression


Co-expression Network