AMCG00013437


Basic Information

Item Value
gene id AMCG00013437
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30859724 ~ 30871739 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013437
ATGAAACCTCCTCTGCACAGAACAAAGCAGTCCAAGCTGTGGCCAGTCTCAGCTCCCAGTGAGCGCAAGGCATCCTCAGGCCTCTCTCAGCGCCAGGAAGAGGACAGAGTGGAGCCCAGCCAGCTAGGTACCTCTGTGCCTCGACTGTTCCCCTGCCAAGCACAACCCTGTGTGCGCGGAGAGTCGCTTCTGCCCCTCAAGAAGAGGGTCAGTGCCACAGTGGGGGTGTCAATGCAGGGCTCCCCagactctgtgctgtgtgccgCCAATGTGCCCGAGATATATAGCGCCCTGCTGGACTGCATGGGCGACTACACTACGGACAGCCGCGGAGATGTGGGAGCATGGGTGCGGGAGGCTGCGATGACCAGCCTGATGGAGGTGACGTTCCTCCTGGTGAGGAGTGACCCAGGGCTGCTCTCTCCTGACATTTGCAGCCGCATGTTGTGCAGCCTGGTCCAGCAGGCGGCGGAGAAGATCGACCGATACCGTGCCCACGCTGGCTCCGTGTTCCTGCGCATTCTGCACTGCCAGGACCCCCCCGTCCCTCACATCCCCCACCGGGAGGAGCTGCTCAGCATCTTCCCCAGtgatGGCGCGGAGACCCTGAACTGGAACGCCCCGTCGCAGGCCTTCCCCCATGTGACACAGCTGCTGCGCCTGCCTGCCTACCAGTACCGCACCCTGCTGgggctctgtGCTGCTAATCCCTGGCGGTTGAGCCTGTGTCAAGTGAGGTTTCAGGGCTCAGCAGAGACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013437 True 762 mRNA 0.62 7 30859724 30871739

Neighbor

gene id symbol gene type direction distance location
AMCG00013422 NA coding upstream 87351 30770263 ~ 30772373 (+)
AMCG00013423 NA coding upstream 130489 30727085 ~ 30729235 (+)
AMCG00013424 NA coding upstream 148645 30707785 ~ 30711079 (+)
AMCG00013413 ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 coding upstream 297162 30560481 ~ 30562562 (+)
AMCG00013414 p4hb,LOC107591928 coding upstream 302499 30547643 ~ 30557225 (+)
AMCG00013438 NA coding downstream 21693 30893432 ~ 30895656 (+)
AMCG00013439 NA coding downstream 35107 30906846 ~ 30907997 (+)
AMCG00013440 NA coding downstream 68341 30940080 ~ 30949350 (+)
AMCG00013446 vasp,LOC102786205 coding downstream 113733 30985472 ~ 31044736 (+)
AMCG00013447 NA coding downstream 235903 31107642 ~ 31131214 (+)
G44323 NA non-coding upstream 85176 30774182 ~ 30774548 (+)
G44322 NA non-coding upstream 85656 30772381 ~ 30774068 (+)
G44307 NA non-coding upstream 122237 30736809 ~ 30737487 (+)
G44306 NA non-coding upstream 124929 30734536 ~ 30734795 (+)
G44182 NA non-coding upstream 402053 30455672 ~ 30457671 (+)
G44379 NA non-coding downstream 51007 30922746 ~ 30934437 (+)
G44380 NA non-coding downstream 52997 30924736 ~ 30926480 (+)
G44383 NA non-coding downstream 64101 30935840 ~ 30936171 (+)
G44388 NA non-coding downstream 95170 30966909 ~ 30970500 (+)
G44433 NA non-coding downstream 227611 31099350 ~ 31106308 (+)
G44325 NA other upstream 82555 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 291505 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 363111 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 429075 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 515719 30339802 ~ 30344005 (+)
AMCG00013468 NA other downstream 1029791 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 1401529 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 1522079 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 1551537 32423276 ~ 32455686 (+)
G44870 NA other downstream 2234553 33106292 ~ 33106595 (+)

Expression


Co-expression Network