AMCG00013438


Basic Information

Item Value
gene id AMCG00013438
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30893432 ~ 30895656 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013438
ATGAGCCACCCGAAAGAGCGCAAACCGAAGAAACCTCACTATATCCCTCGGCCTCCAGGCAAACCCTTTAAGTACCAGTGCTTCCAGTGCCCATTCACCTGCAACGAGAAGTCTCACTTATTCAACCACATGAAGTACAACTTGTGCAAGAACTCCATCACGCTGGTGTCTGAGCAGGACCGCACTGGGAAGCCCGTGAGGCCGCCAGCCCCTGACACGGCCCCCAGGGTCACGGCCGAGCCCGCCGAGAGACCCACCGCCTGCCCCACCACAGACAGCCTGCCCCCTGAGACTAATGCTCCAGCTGAGCCGCAGCTCACAGAggaggggcaggaggaggaggcctTGCAGAGCCGAAGACCGAGGGGATCTCGCAGCCCTAAGGTGTCCCTACAGAAAGAcaccagcccagcccagccccctGAGCCCATCGCGAGGCCGTCTGCCTTCGTGCCCATCGCGGCCAGCTGGCAGCCGGACAGAGACACGGCACTCAAACCAGAGGGCATGGCTCTGTCTGGCCCATTCAAGCCTACCCATTACCATCCCAATGCCCCATGGAGACCTGCCCCCGCATTCGTCCAGCCAGACCCCGCCAGCAAGACAGTTGGCCCCAACTACCCTCCTCCATTGATACCTGAATACCCCCCATATATGTTGACTGAGCACCCCATGCCCACTATATACCAGCATTACCTCCTGCCCGGCCATCCCCACGAGCACGAGGGCAGCCACTTCTCGTCGTACTTCATAGACACCCAGAGGTCCATGCTGCCCCACGTGTTCCCAGCTTCACCCATCCCACTGCCGAGCACTCTCCCCTCTGCCATAGACCACCACTACCGATTCTACCAGTCTGTCCACCCAGCGGCATCATTCCATTATGGCATGTACCGCCCCCCACAAGATCACACGTTTCAGGACTTCAGCGCAAAGCCAGGGATCCCTCTGAATGAGTACAGCAGAGATGTGGGCACAGCGGAGTATAGCCATTGCCGCCCAACACGGAGCCCAGCCGCCACTGCCTCGCACGGTAAACCGGGCAAGGACTACCCACGGCCGGCGGGCAGCACAGGCACAGCCAGCCAGGAGGATAGGGGGGAGACTGGGATGAAGATGAGCCCTAGGGCTGGGTGTGCTGCATCTGGCTCCCCTGACCGACCCAGCCCTACGGCTTTCTCGCAGAAAGACCCAGGCGCAGACAGCCACCATGGCCCCCCAGAGGCGAGGGATACAGGCAGAGCCCCCGGCATCCAACCTGCAGACAACTCCCCCGCCAACCCAGTGACTCCCTCTCACACTGCAGAGCAGCAAGACAGGGGACAACTGGCTGAGAGCTCAGGGGACAGCGGCGCAGAGGTGTGTGAGACACCGGCGGGAGGCTGCAGCCCAAGGGAGACATCAGAGACGGAGGACGAAGACTTGGCTCCTCTGGACCTGTCCACCAGGGACCAGGCTGAGGAGGACGAGAAAGCTCTGCCCCTCCCGGCTAGCAGGGGGAATTCTGTGGATACCAGTGTCACGCCGGACCAGGACATGCCTCTGAACCTCTCCTTGAGGGTGTCCCCCAGCCCAGGGGCCTGCTCCCTCCACGTCTCCCGGCATAGCCCAACTCCGGCGTCGGGACCCGGGGGTGCAGGGCAGGAGTTCCCCCGGCCGGCCCCGGAGCTGCGCAGCCTGGAGCCCTGTGACGAGCAGAAGCAGACAGCTGCCTTTGCACTGTGCCAGTTGGCCAGCTCTCGTTCCCGCAGCCCCACAAATGGGACCCCCACACCGGTCACAGGggccacagacacacaaactgcGGTGCACAGCTCCCCAAGCAAGGGCCAGAAGAGGGCGAGTTGTGCCGAGCCCCGCCAGCTCCCACAGACCACCAAAAGAGCCAAGAGTACAGAGACCAGACGAGCACTGAGGAGGAGGCTGCGCTGCTCGTGA

Function

GO: NA

KEGG:

id description
K24377 ZNF750; zinc finger protein 750

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013438 True 1938 mRNA 0.63 2 30893432 30895656

Neighbor

gene id symbol gene type direction distance location
AMCG00013437 NA coding upstream 21693 30859724 ~ 30871739 (+)
AMCG00013422 NA coding upstream 121059 30770263 ~ 30772373 (+)
AMCG00013423 NA coding upstream 164197 30727085 ~ 30729235 (+)
AMCG00013424 NA coding upstream 182353 30707785 ~ 30711079 (+)
AMCG00013413 ppp1r27,LOC107087444,LOC101068817,LOC107748880,LOC107558871,LOC108242930,LOC101162449 coding upstream 330870 30560481 ~ 30562562 (+)
AMCG00013439 NA coding downstream 11190 30906846 ~ 30907997 (+)
AMCG00013440 NA coding downstream 44424 30940080 ~ 30949350 (+)
AMCG00013446 vasp,LOC102786205 coding downstream 89816 30985472 ~ 31044736 (+)
AMCG00013447 NA coding downstream 211986 31107642 ~ 31131214 (+)
AMCG00013451 NA coding downstream 253517 31149173 ~ 31150309 (+)
G44323 NA non-coding upstream 118884 30774182 ~ 30774548 (+)
G44322 NA non-coding upstream 119364 30772381 ~ 30774068 (+)
G44307 NA non-coding upstream 155945 30736809 ~ 30737487 (+)
G44306 NA non-coding upstream 158637 30734536 ~ 30734795 (+)
G44182 NA non-coding upstream 435761 30455672 ~ 30457671 (+)
G44379 NA non-coding downstream 27090 30922746 ~ 30934437 (+)
G44380 NA non-coding downstream 29080 30924736 ~ 30926480 (+)
G44383 NA non-coding downstream 40184 30935840 ~ 30936171 (+)
G44388 NA non-coding downstream 71253 30966909 ~ 30970500 (+)
G44433 NA non-coding downstream 203694 31099350 ~ 31106308 (+)
G44325 NA other upstream 116263 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 325213 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 396819 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 462783 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 549427 30339802 ~ 30344005 (+)
AMCG00013468 NA other downstream 1005874 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 1377612 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 1498162 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 1527620 32423276 ~ 32455686 (+)
G44870 NA other downstream 2210636 33106292 ~ 33106595 (+)

Expression


Co-expression Network