AMCG00013445


Basic Information

Item Value
gene id AMCG00013445
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 30958189 ~ 30976781 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013445
CTGCCCTCGCCTGCAAGCGACCTTCCAACTTAACGAATCCTTCTGGGGGGAGCCATCTAAGAGACAGCTGAGCAAACCACAGAACAGATGAGCCAGGCCCTCTCAATTCACCATTGACCCTACTGATACTGCTCTACTCTCAGCCACAGAGAGCACATGCCTATGCTACTGTTTCCTCCCCACAATTGATTGCTTATTGCCTACTATGCTCACAGACTGTGCATGTTCGAAGGGgctgtggagaggaggcagtgagACTGGATTAGCGATGGATATGATTGAATTATTTACGTCATTACTGGACCTACACAGGCAGCAGCTGCAAGCCCTCACTAGACAAGGGGAAATCCAGGCAGCGGCCCTCGTTCAGCTCCTGAGAGAGCCAGGATTCCAGCCACGTGGAGGGCTGAACATGCCTAAAATGAGGCCCAATGAAGACCCAGAGTCCTACCTAGCAGTGTTTGAGTGTGTTGCTGCAAGCTGCCAGTTGCCCAAGGAGCAGTGGGCTGCCCAACTGGTAGACCTACTGAGTGAGGATACGTGGGCTGTGGATCCTACCCTGGGGTCACAGGTGGTTCTTGATTATGACTGGCTGAAATCCAGGCTGCTGCACATGGCCAGGTTTTCAGAGGATGCCCACCGGCTGGATTTTCGCTCTCTGGGCTGTCCCCCAGGGAAGAGTCCACGCGCTCTGGGGCAACAGCTCTACAGATCAGCCAGCCACTGGCTCAGACCTGAGAGGCGGACACCTGTTGAAATGCTCCACCGCTTGGTTATTGATCAGTTTTTGTCTGCCCTACCCAAGGACACTGCTGCTCTTGTGCAAAGCCACTGCCCGACCGAGCTGGAGGAGGCTATCCGCATTGCCGAAGGCCACCTAGGCCTCTCTGAATCCTCAGCTCGGCCACCCCCTTCCACCAACAATGCTCCGGAACTAGCTGAAGCTATAGCCAGCCCCAGTGAACCAGAAACTACCATTTCTGTTCAGCAGGCATTGCTGGCGTCCGAGGAAGTGACATATGCTATGGGATTGTGTTTTGTGGCACAGGACGTGTCTTCAGCTACCCAgaCAGAGGATATGCCGAACATTAGTGAGCAGAGTGAAGGCCAAGAAACAAGGACAGAGTCTTTCCTCACCAAGCAAGAAGCAGTTGCTCTGGGATCTGCCTGCATTAAACTGGAGATCCCAGATTTGGAGTACATCTGCCTTGAAGAGGAGAGTTCCTGGGTGAGTCCTTCTCAAGACAAACAGGGGTTAAGTGATTCTGACTCCGCTGGTTCTCACAAGGCAGCATCTGAACCGGTTTCTAGTGCCGAGAAGCTGGAGTCATCACTGCTGGATTCCATTAAACGGGAGTCTGCACTGGAATCTGTCCACAGCAGAGATATAGCAAGCACCACTCATGACAAACTGGAGCCACCACAATCTGAATCGCTAGAGAGGAAGCCACACAACAAACAGATTGAGAAATCCCGGGAAGTGATGGAGCCACTCAGGCTGGTGCGGCCGCTCCTGGACTGTGCCTATGCTCCTGATGGAAATCTGTCTGGAAGCGCACCTTTGGCTTTGCAGAACTTTCAGAAAATTGAATTTCTGAAACATGGACCGatgCGCAGAGGGGAAATGTCTGATCTCAGGACAGAACAAAATGAGAAGGGTGTGCTGATCTGCATTGAAGACAAGGCCTCTCAGCAGGTGCCTGAGGCAGAGCAGTGTAGACAGAACGATCAAGTGGGCTCTCCCAGAGTTAAGAGCGAGTTTCTGGGGAAGCTCCCCTTTCGCTTGGATGAGCCCAACCAGTACGAGTGA

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process

KEGG:

id description
ko04110 Cell cycle
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013445 True 1810 mRNA 0.53 6 30958189 30976781

Neighbor

gene id symbol gene type direction distance location
AMCG00013442 NA coding downstream 20018 30914722 ~ 30938171 (-)
AMCG00013443 NA coding downstream 45377 30910944 ~ 30912812 (-)
AMCG00013441 NA coding downstream 52926 30896736 ~ 30905263 (-)
AMCG00013444 tbcd coding downstream 69999 30871902 ~ 30888190 (-)
AMCG00013435 NA coding downstream 102074 30850121 ~ 30856115 (-)
AMCG00013449 NA coding upstream 77032 31053813 ~ 31068895 (-)
AMCG00013448 NA coding upstream 104871 31081652 ~ 31082490 (-)
AMCG00013450 NA coding upstream 119216 31095997 ~ 31096392 (-)
AMCG00013456 NA coding upstream 225532 31202313 ~ 31203338 (-)
AMCG00013453 prkd2 coding upstream 258372 31235153 ~ 31262580 (-)
G44384 NA non-coding downstream 20332 30937625 ~ 30937857 (-)
G44382 NA non-coding downstream 22989 30931760 ~ 30935200 (-)
G44381 NA non-coding downstream 26922 30925486 ~ 30931267 (-)
G44330 NA non-coding downstream 184079 30772542 ~ 30774110 (-)
G44259 p4hb,LOC107591928 non-coding downstream 359138 30553781 ~ 30599051 (-)
G44420 NA non-coding upstream 69944 31046725 ~ 31047119 (-)
G44469 NA non-coding upstream 326748 31303529 ~ 31310495 (-)
G44487 NA non-coding upstream 392400 31369181 ~ 31371002 (-)
G44507 NA non-coding upstream 477270 31454051 ~ 31492508 (-)
G44519 NA non-coding upstream 529387 31506168 ~ 31506718 (-)
AMCG00013425 NA other downstream 215546 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 471858 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 475863 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 494098 30455727 ~ 30464091 (-)
G44243 NA other downstream 535164 30399887 ~ 30423025 (-)
G44719 NA other upstream 1588979 32565760 ~ 32567952 (-)
AMCG00013488 NA other upstream 1645372 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 2492068 33468849 ~ 33501747 (-)
G45037 NA other upstream 2701443 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 2716063 33692844 ~ 33699712 (-)

Expression


Co-expression Network