Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013451 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 31149173 ~ 31150309 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007218 | neuropeptide signaling pathway | biological_process |
| GO:0006935 | chemotaxis | biological_process |
| GO:0007268 | chemical synaptic transmission | biological_process |
| GO:0070098 | chemokine-mediated signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004950 | chemokine receptor activity | molecular_function |
| GO:0004983 | neuropeptide Y receptor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013451 | True | 1137 | mRNA | 0.60 | 1 | 31149173 | 31150309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013447 | NA | coding | upstream | 17959 | 31107642 ~ 31131214 (+) |
| AMCG00013446 | vasp,LOC102786205 | coding | upstream | 104437 | 30985472 ~ 31044736 (+) |
| AMCG00013440 | NA | coding | upstream | 199823 | 30940080 ~ 30949350 (+) |
| AMCG00013439 | NA | coding | upstream | 241176 | 30906846 ~ 30907997 (+) |
| AMCG00013438 | NA | coding | upstream | 253517 | 30893432 ~ 30895656 (+) |
| AMCG00013455 | fkrp,LOC107699218,LOC107752280,LOC107566082 | coding | downstream | 206496 | 31356805 ~ 31358367 (+) |
| AMCG00013460 | NA | coding | downstream | 314385 | 31464694 ~ 31465848 (+) |
| AMCG00013459 | egln2 | coding | downstream | 334233 | 31484542 ~ 31491406 (+) |
| AMCG00013458 | NA | coding | downstream | 345810 | 31496119 ~ 31502050 (+) |
| AMCG00013461 | NA | coding | downstream | 466615 | 31616924 ~ 31641312 (+) |
| G44433 | NA | non-coding | upstream | 42865 | 31099350 ~ 31106308 (+) |
| G44388 | NA | non-coding | upstream | 178673 | 30966909 ~ 30970500 (+) |
| G44383 | NA | non-coding | upstream | 213002 | 30935840 ~ 30936171 (+) |
| G44379 | NA | non-coding | upstream | 214736 | 30922746 ~ 30934437 (+) |
| G44468 | NA | non-coding | downstream | 153228 | 31303537 ~ 31310491 (+) |
| G44486 | NA | non-coding | downstream | 218898 | 31369207 ~ 31371002 (+) |
| G44529 | NA | non-coding | downstream | 497054 | 31647363 ~ 31665161 (+) |
| G44549 | NA | non-coding | downstream | 634284 | 31784593 ~ 31871473 (+) |
| G44561 | NA | non-coding | downstream | 748312 | 31898621 ~ 31899202 (+) |
| G44325 | NA | other | upstream | 372004 | 30776851 ~ 30777169 (+) |
| AMCG00013417 | mcrip1,LOC106601427,LOC106606980 | other | upstream | 580954 | 30563240 ~ 30568219 (+) |
| AMCG00013416 | alyref,LOC106606979 | other | upstream | 652560 | 30490827 ~ 30496613 (+) |
| AMCG00013408 | NA | other | upstream | 718524 | 30425007 ~ 30430649 (+) |
| AMCG00013399 | NA | other | upstream | 805168 | 30339802 ~ 30344005 (+) |
| AMCG00013468 | NA | other | downstream | 751221 | 31901530 ~ 31911801 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | downstream | 1122959 | 32273268 ~ 32284951 (+) |
| AMCG00013477 | ppp1r37 | other | downstream | 1243509 | 32393818 ~ 32400452 (+) |
| AMCG00013478 | NA | other | downstream | 1272967 | 32423276 ~ 32455686 (+) |
| G44870 | NA | other | downstream | 1955983 | 33106292 ~ 33106595 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000308_01003736_01006059 | NA | coding | CI01000308 | null | 1003736 ~ 1007117 (+) |
