AMCG00013461


Basic Information

Item Value
gene id AMCG00013461
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 31616924 ~ 31641312 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013461
TCTCTGGATGGCTTTGTGTTCGTGCTCAGCCATGAAGGCAGGTTTCTCTACATCTCTGAGACAGTGTCCATCTACCTAGGCCTCTCACAGGTGGAGCTGACTGGCAGCAGTGTGTTTGACTACATCCATCCTGCGGACCACGTGGAATTGGCTGACAGGCTGGGGATGAGGTCACACCTCAGGGGTGGGGCTGGCTCTCAGGCAGCCAATGAGAGTGCTTCCAGTTCAGCATCTACCTCCTCATTGGCTGAGACCCCAGAGCCAGTAGAGACCCCCAGCCCACTGCCCCCTGACGATGACCCCCCAGATAGAGGCTTCTTCGTCCGTATGAAGTCCACCTTGACCAAGCGAGGGCTACATGTCAAGTCCTCAGGCTACAAAGTAATCCACGTGACTGGGCGGATCCGCTGCCGTCCCGTCCTAGCCCATGGCCATTCCCTCTCCTTGCAGCACGCCCTGGGATTGGTGGCCCTGGCTCACACGCTCCCGCCTTCCACACTGAGCGAGGTGCGCATGGAGAGCAACATGATCTCGGACTATATGGACCTGAGCCCAGCAGAGGTGATCGGACACAGCTGCTACGAGTTCATTCATGTACAGGATGTGGACACCATTAGGCAGGGCCATGAAGACTGTGAGTCCGTCTGTCAGTCCATATGCCAGGTGGTGACTGGGTACTACCGTTGGCTCCAGCGTCGCGGCGGCTTCCTATGGATCCAGTCCTGTGCCACCATCTCCATCAACAATAAGACACCCCATGATCGTAATGTAATCTGGGTCAACTACGTGCTCAGTCGACCAGAGCTCCCAGACACCCCCCTGGATATCCAACAGCTGCCAGAGAGCCTGAGGCCTGAGAGAGTGACCCTGACACCCCCTGACCCCCCCCAGCACACCAAGGGTGTTTCTACGTCCCATAAATTTAAATGTGGCAGTGACTCAGGGTCAAAGGTGAGGGAGACATATCCCCCAGGCAGCCAATCGGAGGTGAGGAGGAAGAAGAGCCGGCGGCGCTTCTCTGAGGAAGGCCCCCTGGAAACCAAGAGTCTGCAGAAGGGGAGGGACAGCGAGAGTACTGCATCGTCTGAGGTGGAGAGTGACAGTGAGGGGGAGGGCAGGGTAGGGTACAAGAGGGTCAAAGCTGAGGAAGAGCAGCGGCACGAGACAGTGAGCGATGTGGAGACAGATGTGGAGGTGGGCAGTGAGCGGGGCAAGATTCAAAATGGACACCCGGTCATCCAGCATCTGAAACGGGCCACCCCACCCCACATAAAGACAGAGCCAGACTTTTCCACAACATCGGCAGGCGGAGGGGTGCTGGGGCACTGGGGCTGCTCCTCAGCCCACAtccactccacactgctgtccagCCTGCAAGGCTCTGGTATTCACAAtggcagctgccccccccagTTGGGCGTCCCGGACTCTGCTCTCACACCCCCCGGTGGAGAGGCCCCCCCTAAGAGCCTGTTTaccccctcctccccagccCTGTCCCCCCCGCTGTCGGGCTCCCCCCTCCCCAGAGAGGACAGGCTCCTACCGGGTGGGGACTATGAACTCCTGCACAGACTGGCAGCCGGGGGTGGCGGCCGGGTGCTCCTGCCCCTCCCCCCTGCTGCTCCAGGACCACAGAGCCTATACGCCCCCAGCACCATCCGCTATGCCCCTGCTGAGCTGTCCCCAGCCCAGCCGGACACCCCCCGCCTGGGTCTTCCCCAGGGCTCGCCCACAGACCCCAAGCCCCACTCCCTGTTCCCTCACCTGCAGAGGATCAGTGCACTGCCGCCCTTCAGTGGCTTCTCCTCCCCTGACTCGGCCTTCCCCCCCGGCCTGCCTTTCTGCATCAGTGGACTCCAGGGCACCACTAACAAGGAGGAGGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013461 True 1890 mRNA 0.61 8 31616924 31641312

Neighbor

gene id symbol gene type direction distance location
AMCG00013458 NA coding upstream 114874 31496119 ~ 31502050 (+)
AMCG00013459 egln2 coding upstream 125518 31484542 ~ 31491406 (+)
AMCG00013460 NA coding upstream 151076 31464694 ~ 31465848 (+)
AMCG00013455 fkrp,LOC107699218,LOC107752280,LOC107566082 coding upstream 258557 31356805 ~ 31358367 (+)
AMCG00013451 NA coding upstream 466615 31149173 ~ 31150309 (+)
AMCG00013462 ap2s1 coding downstream 101495 31742807 ~ 31753408 (+)
AMCG00013465 NA coding downstream 131109 31772421 ~ 31773193 (+)
AMCG00013469 NA coding downstream 273789 31915101 ~ 31921375 (+)
AMCG00013472 NA coding downstream 347378 31988690 ~ 31990176 (+)
AMCG00013474 NA coding downstream 584859 32226171 ~ 32226557 (+)
G44486 NA non-coding upstream 245922 31369207 ~ 31371002 (+)
G44468 NA non-coding upstream 306433 31303537 ~ 31310491 (+)
G44433 NA non-coding upstream 510616 31099350 ~ 31106308 (+)
G44388 NA non-coding upstream 646424 30966909 ~ 30970500 (+)
G44383 NA non-coding upstream 680753 30935840 ~ 30936171 (+)
G44529 NA non-coding downstream 6051 31647363 ~ 31665161 (+)
G44549 NA non-coding downstream 143281 31784593 ~ 31871473 (+)
G44561 NA non-coding downstream 257309 31898621 ~ 31899202 (+)
G44581 NA non-coding downstream 388944 32030256 ~ 32030922 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding downstream 412421 32053733 ~ 32057626 (+)
G44325 NA other upstream 839755 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 1048705 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 1120311 30490827 ~ 30496613 (+)
AMCG00013408 NA other upstream 1186275 30425007 ~ 30430649 (+)
AMCG00013399 NA other upstream 1272919 30339802 ~ 30344005 (+)
AMCG00013468 NA other downstream 260218 31901530 ~ 31911801 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other downstream 631956 32273268 ~ 32284951 (+)
AMCG00013477 ppp1r37 other downstream 752506 32393818 ~ 32400452 (+)
AMCG00013478 NA other downstream 781964 32423276 ~ 32455686 (+)
G44870 NA other downstream 1464980 33106292 ~ 33106595 (+)

Expression


Co-expression Network