AMCG00013476


Basic Information

Item Value
gene id AMCG00013476
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32464096 ~ 32475750 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013476
CGCTGAAGAAGCCCTTTATAATAGAGGTAGAGGAGAGAGGATGgatcaaacagaaaacaaaagaagaagtAAAACGCGATTCTCCGCCTCACATGACAGCGATTAGCAGGGAGAGTGAAGCGGGAGGGGAAGCGGCTGGTGAAACTGTTCTCCATTCTGCTACAATCAATTAACTGACAGCGTGCAGTTCTGATGCGCCGGTTCGACGCGCCCCACTTTGCTCAGTTGGATTTGTATGACAGCGGAACCGTCTTCAGAACTAAGAGTGATGGGCAGCCGGAGGGGATGGAACCTCAGACACTGCTGCATGCTGGGCCTGACTGTGCTGGTGTTAGTGGGGGAGCTGGTGGTGAGCCGCGTGTGCAACTCCCTTATCAACATGGTGGACTCCTTCAACACCCTATTTATGCTCTTACACCTGTGCCTCTCCCCCTCAGCTCACAGCCCCCCTGCATCCCCAGACCCCTCCACCTTCAACATCCCCTCCACCCCCTGCCCCTCGCGGCCTTTCGGCTGGGCCAGGCTACGCCCCCTGGGGGCCCTTGTGTCGGCACTgctcctgtcctctctctgcatctctgtctcCCTGGACATCCTCGGGCATATCCTGCGGCCCCACCCCCTGCAGTGGCCCCTATTGGCTGCGGCCGCAGGGGCCACTGGGCTGCTGTTCAATGCCGGGGTTCTATTTGCTTGCTTCGAGGTTGAAGTCCAGACAGAAGAGAGTAGAGtggcagaggaggaagagagtgaAAGCTCGGACAACCTCCCCAGGGGTCCAACAGATGCCCAAGTGCATCTGGCAGAGGACGTGCTTCTGTACTGCAATCCTGGTGCCTCCAGCATCCTTGACCCAGATGCTCACTTAGAGCCCAGCCCCAGCCTTCCCCTAGACTCCCTGCCAGAATTTCACAGCCTGGAGTCCTGGAGGCAGCTGGACATTCACTCTGAGGATTTTGCTCCCCATGGTACACCTGCCAGCCTTCCACACTCAGTCAATAAGGGCATCCTAGAGGCACAGCGCACTTGCACAGATCTTGTACTGAGCAACCCAAACAGTGAGAAGGCCCCTCCTGTGCCCTGCAGCGACCAAACAGATTCTTCAGTACCCAAAGAGTACTACAGAGAGCCAGTGGTGGAGCCAGCCTCCAGAAGGCGAGGGTGGCAGTGTGGGCTACCTGCTCTCCTGCGTGTGGCCCAGAGCCTGCTGGCATCGGCACTGGTGCTAGCCAATGGCCTAGCCCAGTTGGTGCTGGGCCCAGAATGCCCTGCGGGGGAGAGGGGCTGCGACCTGTATGTCTATCTAGACCCAGCCTTCTCCCTGCTGGCCGTTGTGGTCCTGCTTGCGGCCACTCTGCCTCAAGTTAAACGTTACGGATTCCTGCTGCTCCAAGGAGTGCCCACCCATATCGCCCTGGACAACCTGGTCGCTAGGATCGGGCAGCTCCCTGGGGTGCTGTCCATTCACGAGCTGCATGTGTGGCAGCTGTCAGAGAAATTCCTGGTGGCTTCAGTTCACGTGCACTGTGACCAGCTTGACGGGCACCAGAGCCTGTTGGCAGCCATCACCGAGATCTTCCAGAGCGTGGGCGTGAGCTGCTCCACTGTGCAGCCTGAATTCCACCCCCTTCCCACCCCCCAAAGCACAGACCCATTGCCCCTACCCCAATGCAGTCTGGCATGTAGGAAGGAGTGTGCCAAGAAGCTATGCTGCCAGGGAGGCCAACAGCATCCCCCAGTGCCTCCTCATCCTGGACAGCTCCAGAATCACTTCCCTGAGCTAGTTATTGAGAACACCTACCTTTGATGTGGCTGGGGAACAGGGGTGGAGGAGGATTTTGCAGAGCCCAGTGCAAGCCCAACTCAAGCCTTCGGACACATAGACATCCTGAAACTCTTTAACCAGTCTATCactcatttagttttttaaatagagGTATTTACATAATATCATCTTAGAGCAGCTGAAATCTACAGTGTCTTAAGTCTGATCTACTTCAGGAAATAGCAGTCAAAGGGTTGAGGCTGGGGAAGAAATGTGAATGCAGAAATTAAGGGAGTTAGTTTTAGTGTCTGACTTATCAGTAGATCACTTTGGCCCCTGACTATCTCGTATTAGCGCTGACACAttctatatacagttaggtccataaatatttggacagtgacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013476 True 2171 mRNA 0.55 4 32464096 32475750

Neighbor

gene id symbol gene type direction distance location
AMCG00013479 LOC107735004,LOC107735469 coding upstream 74134 32346138 ~ 32389962 (+)
AMCG00013474 NA coding upstream 237539 32226171 ~ 32226557 (+)
AMCG00013472 NA coding upstream 473920 31988690 ~ 31990176 (+)
AMCG00013469 NA coding upstream 542721 31915101 ~ 31921375 (+)
AMCG00013465 NA coding upstream 690903 31772421 ~ 31773193 (+)
AMCG00013481 NA coding downstream 14321 32490071 ~ 32494429 (+)
AMCG00013485 NA coding downstream 113978 32589728 ~ 32599218 (+)
AMCG00013487 NA coding downstream 128985 32604735 ~ 32608797 (+)
AMCG00013486 NA coding downstream 153177 32628927 ~ 32636264 (+)
AMCG00013490 NA coding downstream 166695 32642445 ~ 32656154 (+)
G44620 NA non-coding upstream 177937 32286014 ~ 32286159 (+)
G44613 NA non-coding upstream 272701 32191179 ~ 32191395 (+)
G44598 NA non-coding upstream 325519 32136230 ~ 32138577 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding upstream 406470 32053733 ~ 32057626 (+)
G44581 NA non-coding upstream 433174 32030256 ~ 32030922 (+)
G44702 NA non-coding downstream 66885 32542635 ~ 32543676 (+)
G44747 NA non-coding downstream 179753 32655503 ~ 32655702 (+)
G44769 NA non-coding downstream 280988 32756738 ~ 32758380 (+)
G44790 NA non-coding downstream 361565 32837315 ~ 32837843 (+)
G44860 NA non-coding downstream 607978 33083728 ~ 33088760 (+)
AMCG00013478 NA other upstream 8410 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 63644 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 179145 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 552295 31901530 ~ 31911801 (+)
G44325 NA other upstream 1686927 30776851 ~ 30777169 (+)
G44870 NA other downstream 630542 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 900770 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 966644 33442394 ~ 33449093 (+)
G45029 NA other downstream 1219842 33695592 ~ 33699545 (+)
G45072 NA other downstream 1638923 34114673 ~ 34114939 (+)

Expression


Co-expression Network