AMCG00013477 (ppp1r37)


Basic Information

Item Value
gene id AMCG00013477
gene name ppp1r37
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32393818 ~ 32400452 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013477
atggacagtgagatggagagggagacaCCCTGCACCCAGAGCCTGGAGACACTCAATCTAGGCCACAACTCGGTGGGGAACGAGGGGGTCCACAAGCTTAAAGACGGGCTGATTGGGAACCGCTCTGTTCTGCGACTCGGCCTGGCCTCCACCAAGCTCTCCTGCGAAGGGGCTGTGGCTGTAGCCGAGTTCATCGCAGAGAGCCCCCGCCTGCTGCGTCTGGATCTGCGTGAGAATGAGATCAAGACAGGTGGTCTTATGGCACTTTCCTTGGCCCTGAAGGTCAACACCTCTTTACTGAGGCTGGACCTGGACCGAGAGCccaagagagagacaGTAAAGAGCTTCATTGAGACCCAGCGAGCTCTGCTGGCTGAGATCCAGAATGGCTGCAAGCGCAACTTTGTCCTGGCCAAAGAGAAAGAGGAGACGGAACAAAAGATGCGCCATTCAGCTTCCATGCCCGAAATCACGCctgaggaggatgaggaggaggcggaggaggggggggaggaggaggaggaggaggatgaggaggatgaggatggtgggggggcagagggtGCTGAAGTAGGTCAAGGGGAGGGTGAAGTGGAAggggaggacagagagaaagagggaggcaGCTACAGTGAAGAAGGCGGGGAGGAGACTAGGACAAGGGGAGAAATTGATGGTGGATCCGCAACAGACTGCTCCCACACCAATCAGGAATCTGATTCAGACacggaggaggaagaggaggaggaggatgaggaaggCCAAGAAGCAGCCACAGCAGAGCAATCAACCCGCGAAGTGCCTCCTGCCCAAATCAGCCCTCTGATCTCAGCCACGCCCCCCGTGGACAGGGCCAGCTCCCCACTGCCAGGCCACCCACAAACAGGGGCAGGGACAGAGGTGGCAGTTACTCTCACCCAGTCAGCATCCCCTGCTTCCCCACACACCCCCACATTGCCCGGCAATGAGCGTTGCATCTCAGTATCCAGTCCGGGACGGGGACACAAAATCTTTGTGGTGACACGAGTGGAGAGCCCTCCAGAGCAGCTGCAGCTGCCTCctactctccttcctcctcaaGTGAAGAATGCGCCCCCTTTGCCCAATCCCCCAACTCCAGTCACAGACCTAGGGCAGCTGCCTCCCCTGGACACATCAGCCGGCCCTGTGCCCGTAGCTGTGACCAGTCGAGACACCCCCAACACAGACGAGTGCTTGCTGATCACCACGGGCTCTCTGCCAAACGGACTCAAGCCAGAATTCGCCTGCATCCTGCCAGACCTAAGTGAGCCCCCGACCCCCAAAGTGACAAGCTGTTCGGCAGAACATGAGCTGAAATGTGACAAGGAGCTAGAAGAGTTGCTACTGGAGGCCAGCCTGGAGACTGTGAGAGAAGCACCATGACACTGCTGGGGGCCTTCAGTTCCCTGGGATGGACAGCTCTGGGTCGTCCTTGGGACTCGTCCGCTTTGgcttttagatttttcttttttgttcttctccccccccccccatgttcATCCCAGTAGagaggggggaataaaaaaaaaataaaaaaataaaaaaaagacaggatgACGCATATATACACAATGCTACCGTAAGACAATAttcaaaaagaaacaacaattgAAAAAATTTTTAAGAATCACACTTCATTTCTATCACTACATTCCATCTGCTGCCCTGAGGTGGAGGGGAGATTGCAAGAGTTGAAATCTCTGTTATGCGCGGTTTGCTCCTTTTAGGCCCATAAACCAAAGAAACAGGACCCTGGAGAGGACTCTGCACAGCCTTGCCTGTTTGTGGAAGGTGGAAAATTGCCCTCCAAGCCCCCCTGCCTTGGACCCCataccttctctctctcacctccttcctcctgccagcatcTCGAGAATAGCCTGTAACCCATTTCAGGACTAAAAGAGCATGCTTATGCCCAGGGCTGGTGTAATACTACAAAGTACCGCAATGGAGAGACTGGAATAACGGAACATTAGGAGAATCTGCTTGGCCTGGCTTTCACTGCAGATTATTGTAGCTGtcatatatttcatttcatagAAACAGATTGTGGGATGCGATTGTGGGGGGCGGGTTGAATaatgtgttcagtttttttgttttgttctttgtttttcaccCCATAAGTCAAGGGAACTCTCTTCTGCCTTCCTCATCCAATTCCTCTTTTCCCAGGATTCAACACTGTGCAATTTACCGGATTCCTGTCTGTCTTTATACAGCAATAGCTGGACACCGTTCTACCAAATGTCGGGCTAGAGAAAAGTAACCGCGAACATGATCTCCACCTTTGgttcgttttatttttatttttatttttccgaTTCCCTCTCTGCATCAGCGCTgggtttctttgctttctctatctttaaaaaataatccaacTAATAAGGTTGGATGAGGAAAAGAAAGGACATGAGCAAAACTAAGCAACAGGCGAGAAATGAAAGACCAGAAAACAGATGGATTGGGTGACACCATGGCTGCAGTCTCTCCTCTTCTTCGCCCCCTCCACTCACAGTCTTCCATCAGAATCACATACAGTGCGGCCCACACACAGGCTCCTCTGCCTTCacaatcaactttttttttttttta
>TU55639
GGGTGAAGTGGAAggggaggacagagagaaagagggaggcaGCTACAGTGAAGAAGGCGGGGAGGAGACTAGGACAAGGGGAGAAATTGATGGTGGATCCGCAACAGACTGCTCCCACACCAATCAGGAATCTGATTCAGACacggaggaggaagaggaggaggaggatgaggaaggCCAAGAAGCAGCCACAGCAGAGCAATCAACCCGCGAAGTGCCTCCTGCCCAAATCAGCCCTCTGATCTCAGCCACGCCCCCCGTGGACAGGGCCAGCTCCCCACTGCCAGGCCACCCACAAACAGGGGCAGGGACAGAGGTGGCAGTTACTCTCACCCAGTCAGCATCCCCTGCTTCCCCACACACCCCCACATTGCCCGGCAATGAGCGTTGCATCTCAGTATCCAGTCCGGGACGGGGACACAAAATCTTTGTGGTGACACGAGTGGAGAGCCCTCCAGAGCAGCTGCAGCTGCCTCctactctccttcctcctcaaGTGAAGAATGCGCCCCCTTTGCCCAATCCCCCAACTCCAGTCACAGACCTAGGGCAGCTGCCTCCCCTGGACACATCAGCCGGCCCTGTGCCCGTAGCTGTGACCAGTCGAGACACCCCCAACACAGACGAGTGCTTGCTGATCACCACGGGCTCTCTGCCAAACGGACTCAAGCCAGAATTCGCCTGCATCCTGCCAGACCTAAGTGAGCCCCCGACCCCCAAAGTGACAAGCTGTTCGGCAGAACATGAGCTGAAATGTGACAAGGAGCTAGAAGAGTTGCTACTGGAGGCCAGCCTGGAGACTGTGAGAGAAGCACCATGACACTGCTGGTAAACTTAATCACACActcaataaattattattattagtagtagtagtaatatttatatattattatattgtgcTCTGTTAACTGCACTTTCCATGCAATAATGTCCAGAGGGATTTGGTTGAAGAATTCTCTCCAGTGAGCTAGATAAATGCATCCATTTTCAAGTTAAACcttatttttcttcctgcagaaaacaaacataagtCGGG

Function

symbol description
ppp1r37 Predicted to enable protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of phosphatase activity. Is expressed in anterior axial hypoblast; hatching gland; and polster. Orthologous to human PPP1R37 (protein phosphatase 1 regulatory subunit 37).

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 37

GO:

id name namespace
GO:0010923 negative regulation of phosphatase activity biological_process
GO:0004864 protein phosphatase inhibitor activity molecular_function
GO:0019902 phosphatase binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013477 True 2622 mRNA 0.52 6 32393818 32400452
TU55639 False 1039 lncRNA 0.53 2 32396854 32398159

Neighbor

gene id symbol gene type direction distance location
AMCG00013479 LOC107735004,LOC107735469 coding upstream 3856 32346138 ~ 32389962 (+)
AMCG00013474 NA coding upstream 167261 32226171 ~ 32226557 (+)
AMCG00013472 NA coding upstream 403642 31988690 ~ 31990176 (+)
AMCG00013469 NA coding upstream 472443 31915101 ~ 31921375 (+)
AMCG00013465 NA coding upstream 620625 31772421 ~ 31773193 (+)
AMCG00013476 NA coding downstream 63644 32464096 ~ 32475750 (+)
AMCG00013481 NA coding downstream 89619 32490071 ~ 32494429 (+)
AMCG00013485 NA coding downstream 189276 32589728 ~ 32599218 (+)
AMCG00013487 NA coding downstream 204283 32604735 ~ 32608797 (+)
AMCG00013486 NA coding downstream 228475 32628927 ~ 32636264 (+)
G44620 NA non-coding upstream 107659 32286014 ~ 32286159 (+)
G44613 NA non-coding upstream 202423 32191179 ~ 32191395 (+)
G44598 NA non-coding upstream 255241 32136230 ~ 32138577 (+)
G44590 calm1,LOC102778633,LOC107670363 non-coding upstream 336192 32053733 ~ 32057626 (+)
G44581 NA non-coding upstream 362896 32030256 ~ 32030922 (+)
G44702 NA non-coding downstream 142183 32542635 ~ 32543676 (+)
G44747 NA non-coding downstream 255051 32655503 ~ 32655702 (+)
G44769 NA non-coding downstream 356286 32756738 ~ 32758380 (+)
G44790 NA non-coding downstream 436863 32837315 ~ 32837843 (+)
G44860 NA non-coding downstream 683276 33083728 ~ 33088760 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 108867 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 482017 31901530 ~ 31911801 (+)
G44325 NA other upstream 1616649 30776851 ~ 30777169 (+)
AMCG00013417 mcrip1,LOC106601427,LOC106606980 other upstream 1825599 30563240 ~ 30568219 (+)
AMCG00013416 alyref,LOC106606979 other upstream 1897205 30490827 ~ 30496613 (+)
AMCG00013478 NA other downstream 22824 32423276 ~ 32455686 (+)
G44870 NA other downstream 705840 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 976068 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 1041942 33442394 ~ 33449093 (+)
G45029 NA other downstream 1295140 33695592 ~ 33699545 (+)

Expression


Co-expression Network