Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013481 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 32490071 ~ 32494429 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02902 | RP-L28, MRPL28, rpmB; large subunit ribosomal protein L28 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013481 | True | 762 | mRNA | 0.55 | 5 | 32490071 | 32494429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013476 | NA | coding | upstream | 14321 | 32464096 ~ 32475750 (+) |
| AMCG00013479 | LOC107735004,LOC107735469 | coding | upstream | 100109 | 32346138 ~ 32389962 (+) |
| AMCG00013474 | NA | coding | upstream | 263514 | 32226171 ~ 32226557 (+) |
| AMCG00013472 | NA | coding | upstream | 499895 | 31988690 ~ 31990176 (+) |
| AMCG00013469 | NA | coding | upstream | 568696 | 31915101 ~ 31921375 (+) |
| AMCG00013485 | NA | coding | downstream | 95299 | 32589728 ~ 32599218 (+) |
| AMCG00013487 | NA | coding | downstream | 110306 | 32604735 ~ 32608797 (+) |
| AMCG00013486 | NA | coding | downstream | 134498 | 32628927 ~ 32636264 (+) |
| AMCG00013490 | NA | coding | downstream | 148016 | 32642445 ~ 32656154 (+) |
| AMCG00013491 | akt2 | coding | downstream | 198745 | 32693174 ~ 32711904 (+) |
| G44620 | NA | non-coding | upstream | 203912 | 32286014 ~ 32286159 (+) |
| G44613 | NA | non-coding | upstream | 298676 | 32191179 ~ 32191395 (+) |
| G44598 | NA | non-coding | upstream | 351494 | 32136230 ~ 32138577 (+) |
| G44590 | calm1,LOC102778633,LOC107670363 | non-coding | upstream | 432445 | 32053733 ~ 32057626 (+) |
| G44581 | NA | non-coding | upstream | 459149 | 32030256 ~ 32030922 (+) |
| G44702 | NA | non-coding | downstream | 48206 | 32542635 ~ 32543676 (+) |
| G44747 | NA | non-coding | downstream | 161074 | 32655503 ~ 32655702 (+) |
| G44769 | NA | non-coding | downstream | 262309 | 32756738 ~ 32758380 (+) |
| G44790 | NA | non-coding | downstream | 342886 | 32837315 ~ 32837843 (+) |
| G44860 | NA | non-coding | downstream | 589299 | 33083728 ~ 33088760 (+) |
| AMCG00013478 | NA | other | upstream | 34385 | 32423276 ~ 32455686 (+) |
| AMCG00013477 | ppp1r37 | other | upstream | 89619 | 32393818 ~ 32400452 (+) |
| AMCG00013473 | LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 | other | upstream | 205120 | 32273268 ~ 32284951 (+) |
| AMCG00013468 | NA | other | upstream | 578270 | 31901530 ~ 31911801 (+) |
| G44325 | NA | other | upstream | 1712902 | 30776851 ~ 30777169 (+) |
| G44870 | NA | other | downstream | 611863 | 33106292 ~ 33106595 (+) |
| AMCG00013515 | dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 | other | downstream | 882091 | 33376520 ~ 33412841 (+) |
| AMCG00013516 | NA | other | downstream | 947965 | 33442394 ~ 33449093 (+) |
| G45029 | NA | other | downstream | 1201163 | 33695592 ~ 33699545 (+) |
| G45072 | NA | other | downstream | 1620244 | 34114673 ~ 34114939 (+) |
