AMCG00013489


Basic Information

Item Value
gene id AMCG00013489
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32609881 ~ 32620938 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013489
GTAGCCGGAAGGCGAGAGCGGTGTGTCGTGCGGGCTGCGCGGTGCTCTCTGCACATAGTGGGGGAGGCAGCGTCGTGTTGTGAGATCGGCGAGGGGGGCTAACATGGAAGAAAAGGAACTCATTTGTGGACAGCCCGTGTGGTAACCGCTGAACACAGATTTACAGGGACTGTCGTGACTTTGCTGGCTGTATGAACACTGGAGACCTGCAACGCAACGCGGCGCAGCGCAGTCCGGCTCCGCTCTGCCCGCCAGGTTTTGCGTTAGTGCTGCTCTGACACAAGATGTTGGACAAGTCGCGATTGAACGGGATACATTAGCGGACATGGAAGCGCCTCGAAACAATCATCACATTGACAGCGTGCATTTATTCTGAACCAATTACAGTGGGAGTTGACTGCACGGGGGATCGTGTTGATATCAGACTGAAATGCAgggaatgtatttaaaataaaatagcgGCTACTAAAGTAGTAGAAGGACGTCCGGTTGCCGAAGTAAATTACCGCTACATTAAACAATGCTGTGCATGGAAGCAGAGATTGTACACTGCTACAAGGAAAACTTGATGGAAACTTTTCATATAACCGTGCACACATAGTTGTGCACCTTTGTCGAAGTTACTTCTGAACGAGCGCATTCTATACATTCTATAGAAAATGCTATACATTCTATAACAGCAGTGCATTTATATCGAGGGAGGAAGAGCGAGCCGGTCGCGTCAGCGTGTGATCGCGCCTGGGAATTACGTGGCGTCACGTATTGGAGAGAGAGACCGTTACAGCGGATCAGTGAGGAGCATGGCTAACTAGCGGTGCTGTACACGCaacttttaaaaagtgcacATTTAATACGCCTATAAATCACCAAGTCATTTGTTCACATTTAAAACGtgccattatttattattttgctgatgtttaaataatgaaacatttagaaatgtaagCGATCTGTGCAAGAAAGCCAGTACTCGCAGGTATACGGGAAGATCTACGCAGGGACGGGGTTTCCAGCTGCTTGTCGAGTGAAGAGCTGCGTTTTGTCCGCTTGGTCTCCGGACTCCGTGCGAAGATGTCGAAGAGCAGTCGGAGGTACAAGCCCGCCCCGGCCGGTAACGGCAGCGCCGCGGTGAGGGTGCCCCGGGCCCGGgtgctgctgtgctgtctgTGCGGGGTCCTGGCCGTGGCCGGGATCCTGGGGTTGTACCTGTCCGCCGACACCGCCAGCGAAGTGAGGGTCAGGTCTTCACACTGGACCAAAGACAGACTGGCCCACAAACCCCGGAAGCAGTCGTCCAGCCAGGTGCGGGAGCTGGTGTCCCACGTGGACGGGGGCCGGCTGTGGGAGATGCACCTGCAGCCCATCCTAGTGGAGAGACTGCCAGACACAGCGGGCAGCCAGGCTGTGAGGAAGcATATCACCTCTCAGCTGGGCTCTCTCTCTGCGGGCTGGGTAGTGGAGGTGGACTCGTTCACCTCTCCCACCCCTCGGGGTCCCCTCACTTTCTCTAACGTGCTGGCGGTCCTGGATCCCAGTGCTCCCCGGCGCCTCCTGCTGGCCTGCCACTACGACACGAAGCAGCTCCCAGCATCCCCGACCGGACGCCCATTCCTCGGGGCGAGCGACTCTGCTGTTCCCTGTGCCATGATTTTGGAGTTGGCAACCGCCCTGGACTCGAAGCTCCGAGCACTCGCACTACAGAAGTCTCCAGTCACTCTGCAGCTGCTGTTCTTCGATGGAGAGGAGGCCTTCCAGGAGTGGACGCCCACGGATTCCCTGTATGGTTCCAGGCACCTGGCAGAGCGCATGGCCAGGACAGCACACCCCCCCGGGTCCCCTGACAGCACCCTGCTTGATGCTATCgacctGTTTGTCCTGCTGGATCTGATTGGTGACTCCAGTCCTCTGTTCGTCAATCACTTCGACAACACGGCCCGCTGGTTTGACCGCCTCATCGCCGCTGAGAAGCGGCTGCACAAGCTGGGCCTGCTGTCGTCCCATCCCTCTGAGCAGAGCTACTTCAGGAAGGACGTCTACCTGGGCCCAGTGGAGGACGATCACATGCCCTTTCTGAAGAAGGGTGTTCCCGTGCTCCACATGATTGCCACTCCCTTCCCCTCATTCTGGCACACCCTGGAGGACACGGAGGACAGAATGCACCGACCCACTGTTGACAACCTCACCAAGATCCTGGCCGTGTTCCTGGCAGAGTACCTGGGGCTGTGACCCTGCACCTTACCTTTCTCCTGCCTGCAACCCCCTTGCCCTTTGTGAATGTTTACAGTATTATAACCTGGataaagcacagagaaaagCGAAGCAAAGCCCAGACATAGAGCTTAGACGTAGAGCTCTTTGGTAGCAATTCAAGTAAAGTACGggaacatgaaaataataaataaatacaaatcttttcaGAAGGGCCCTGCACCCCCAGGACCCTCATCCTGCTGTGCTTACAAACTGCCTGCAGGTCTCCCCAACCCCACACCCACTCTCTCTGACGATTCAACCTCAAGAATCAAACCACAAAAGAACACTACGAATCCTTTAAGCACCCTAATCCAAAACGGAAACAAATCCGTAAAGTGAATCATAAGCTGTCATTACAGGGCTGGAAATCCTACAGTTGGAGGATGTTCAATACGCTTCATCAACGTGCATTATATACTGGGTTGGCATGCGGCAGTGAACTGGGTGCTCTCCTGCTTCTGAATACTTTTCTTCTTGATGTCTTGTCAAGCCAGGGCTGGAGGACTCGTTTTCGAACAGCTGGGCAGTCCCATTCCCCCCACAAGGGAAGCGATATGTGATGTGAAACAGTCTGTTTGCTGTCAGTTTTggttctcttttctctttccacACTGTGGAAAACTGCAATTTGCTGCAGTACTCTCCTGATTTGTGGATCAGGTGGAAACTCTTCAATGAAGTTGAGGAAtggcttaattaaaacaaaagaggtTAGCTTAGATTGAAActagttaaaatacataaagagtTTAAAATTGCAAATGCCATATCTTGCTATACTTTCCTGTATGGGTTAAGAGACTTAATTGGTGTTGATCGGTttatgggttttctttttttcagctgCATCCTATTAGTCTTGCTCCTACTGTGAAAATTCTGTGTACAGTTTTCAACCCAGCTGCAGCCTGAGATGGACATGCTGTGCAAAGTGGCTCCTAAATCAGAAACCCTGACTGTTGTAATAAGCAAGCCCTGACCCATAGAATTGCTTAAGCCCCATTACTTAGCAAGTGCTGGTGGTCCAACAATTCAGCTTTCACCTTTGTGGCCCCACCTTTCGCCCACCTCTGACTAATTAATTTTTGTAAAAGGTAAAATGTCCTTCTCCACTGTAATGAAACCGTGCCCCTCCAGCACACCTGTAATGTTTGCTTGCAGTCATTAATTCTGTAGGTATATTACTTGCAAAACAAGAGTTTTAGTCTTAGGAATCAGAGCggaatgtataaatgtgttgcGGCCGAGTGCGACTTTGTGATTAAGGTTCTACAAAACTTCTGGAATTTAACTTCCTGACTAACCTAGTTCTCAGTCTGAAATCTCATGATGTCTGTCCAGTCACTGCAGTGAACCTGATTATGTGTGCTAAACCTAGGCACTGTCTAACTAGTCTACTAGTTATAGAATATAATTAGATAAGGAGAGAAAATTATGGTCCATTTACAGCTGAGTCAGTTAAAAGTAAATGTGAAGGACAGTGGACCAATATTAAAAACTCTTTACTCATCATGAATTATGCTAAAAGCAGCATGCTATTTTGACCAAGCACACTTGCTTAGCAATCACAGACCTCCAACACCTAGGATGAATGAATTGATTAGCTGGCAGAATGTAATATCATCCCCTCTATCCACACAGGCCACCGTACTGCAGCAAAACTGGGGACAAGAAAGAGAAATCCCCTTTTGAGGAATCCTGCTGTGGTTATTTTTCcaatccaaataaaaattaattgtGGAaaccagttttctttttttttttttcttgattcttATTGGTGTTCA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K00683 QPCT; glutaminyl-peptide cyclotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013489 True 4043 mRNA 0.49 7 32609881 32620938

Neighbor

gene id symbol gene type direction distance location
AMCG00013483 NA coding downstream 28578 32572426 ~ 32581303 (-)
AMCG00013484 clptm1,LOC107582636 coding downstream 44527 32545177 ~ 32565354 (-)
AMCG00013482 NA coding downstream 70055 32521650 ~ 32539826 (-)
AMCG00013480 NA coding downstream 198013 32408373 ~ 32411868 (-)
AMCG00013475 NA coding downstream 493554 32101568 ~ 32116327 (-)
AMCG00013496 NA coding upstream 212909 32833847 ~ 32836598 (-)
AMCG00013507 NA coding upstream 475701 33096639 ~ 33108496 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding upstream 501034 33121972 ~ 33122871 (-)
AMCG00013506 NA coding upstream 509116 33130054 ~ 33143388 (-)
AMCG00013511 NA coding upstream 625226 33246164 ~ 33263876 (-)
G44703 NA non-coding downstream 66204 32542648 ~ 32543677 (-)
G44668 NA non-coding downstream 168510 32433288 ~ 32441371 (-)
G44651 NA non-coding downstream 225951 32316180 ~ 32383930 (-)
G44623 NA non-coding downstream 323903 32285055 ~ 32285978 (-)
G44615 NA non-coding downstream 416416 32193227 ~ 32193465 (-)
G44748 NA non-coding upstream 34587 32655525 ~ 32655725 (-)
G44749 LOC105030512,LOC106609167,LOC106584099 non-coding upstream 35767 32656705 ~ 32657232 (-)
G44777 NA non-coding upstream 135826 32756764 ~ 32758330 (-)
G44803 NA non-coding upstream 232318 32853256 ~ 32853765 (-)
G44815 clasrp,LOC102789808 non-coding upstream 313129 32934067 ~ 32938173 (-)
G44719 NA other downstream 41929 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 1867238 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2123550 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2127555 30468630 ~ 30482326 (-)
AMCG00013409 LOC107590438 other downstream 2145790 30455727 ~ 30464091 (-)
AMCG00013488 NA other upstream 1215 32622153 ~ 32627904 (-)
AMCG00013518 NA other upstream 847911 33468849 ~ 33501747 (-)
G45037 NA other upstream 1057286 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 1071906 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 4258255 36879193 ~ 36885493 (-)

Expression


Co-expression Network