AMCG00013500


Basic Information

Item Value
gene id AMCG00013500
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 32888154 ~ 32917516 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013500
ATGAGAGTAATCCTCTATGTTCGTAATGAGATGCATGCTGTTCCTTCACTTGACtcctggAAATCCTTCTCTCTGATCCTGGAGGTACTGGATCATGACAACGAGACCGCAGAGCCAGtTCTAGGGCAGGGTGAGCTAATCGACCGGGTGCTACTATCCTCCATGCTGAACTCCGGGGAGCAGTGGCAGAACTTCCGGCACCACGGCCGCTCCAACCTGGAGTACAAGCTGCGCTTTCGCTGCGAAGCCAACTACTATGGCCCCCTATGCAACAAGTTCTGCCGCGCACGTGACGACTTCTTCGGCCACTTCAGCTGCGACCCCAGTGGCATGAAAATCTGCATGGATGGCTGGATGGGGCCCGAGTGTCGCcaggCTGTCTGCAGACAGGGCTGTCACCTAGCCCATGGCTACTGCAATTTACCAGGAGAGTGCAGGTGTCACTATGGTTGGCAGGGGTCGCTGTGTGACCAGTGTGAGACATTCCCTGGCTGTGTTCACGGCAGCTGTACGGAGCCCTGGAAGTgcgtgtgtgacaccaactgggGGGGCCTGCTGTGTGACAAAGACCTTAACTTCTGTGGGACACACCAGCCTTGCCGGAACGGGGGTACCTGTGCCAACACAGAGCCCAACGAGTACCAGTGTGTGTGCCAGGAGGGCTTCCGGGGGCGTAACTGTGAGATCGTGGAGCACGCCTGTCTGTCCAACCCCTGTGCCCACGGAGGGACCTGCCTGGAGGAAGCTGGGGCATTTCGCTGTGCGTGTCCTGAGGGCTGGACTGGAGCCACCTGTACTGCTGACTCCAGCGAGTGCCAGTCCAGTCCTTGCAGTCAGGGCGGGACCTGCCGGGAGCTAGCGCAGGGGTTTGAGTGCCTGTGCCCACCGCAGTGGACTGGCAAGTTGTGCCAAATAGACACGAATGAGTGTGACACAGGGGTGTGTGTCAATGCCCTGCTTTGCCGCAATCTCATTGGGGGATATATCTGTGACTGTCTGCCAGGCTGGACAGGGCAGAACTGTGACATCACTATGAGCCTTGAATCTCTGACAGGGTGCCAGTGCCTGCCAGGATACACGGGGCCGCTCTGTCAGACCCGACTGAGCCACTGTGAAAGTGCCCCCTGTCTGAATGGGGGACACTGTATTGAGCAGGAGGCAGGGCCCAAGTGTCACTGTCCTCTGGGTTACAGCGGGGAGCACTGCGAGGTGGTGCTGAACCTGTGCAATCCAAATCCTTGTCAGCAAGGGGTGCCGTGTCAGAGCACTGAAGGTGGCTACCTTTGTGCCTGTCCTGAAGGCTACGAGGGCAACGAGTGCATGAGCCTGAAGGACCCCTGCCATGGGACACACTGCCAAGGTAGGCCCTGGACGAAGGAGCGCCAGCAAGCTGGGCAGGATGAGGGCATCAATAACCAGCGTGAGTGCGTCACTCTCATCCGCAACCTGGAAAAGCCCCCGCCCCCAGGAGCCCGCCACTGCGAGGAGATTGAGCTGTCGCTGCCATCCACCCCTGATGCCAAGAAGCCCCGGCAGGCCAGCACCAAGCTCGACATCTCCAACAGTGAGCGTGAGAAACTCAACCGCTTCCACTTCCCTGAGAACCAGGAACTAGAGGTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013500 True 1623 mRNA 0.59 13 32888154 32917516

Neighbor

gene id symbol gene type direction distance location
AMCG00013497 NA coding upstream 12024 32853626 ~ 32876130 (+)
AMCG00013494 snrpa coding upstream 44803 32838185 ~ 32843351 (+)
AMCG00013495 itpkc,LOC102792490,LOC102297313 coding upstream 59135 32802249 ~ 32829019 (+)
AMCG00013493 NA coding upstream 132151 32752772 ~ 32756003 (+)
AMCG00013492 NA coding upstream 163370 32714424 ~ 32724784 (+)
AMCG00013498 clasrp coding downstream 10300 32927816 ~ 32947713 (+)
AMCG00013499 NA coding downstream 33799 32951315 ~ 32963942 (+)
AMCG00013502 NA coding downstream 60415 32977931 ~ 32996084 (+)
AMCG00013501 NA coding downstream 97799 33015315 ~ 33021800 (+)
AMCG00013504 NA coding downstream 115096 33032612 ~ 33045354 (+)
G44790 NA non-coding upstream 50311 32837315 ~ 32837843 (+)
G44769 NA non-coding upstream 129774 32756738 ~ 32758380 (+)
G44747 NA non-coding upstream 232452 32655503 ~ 32655702 (+)
G44702 NA non-coding upstream 344478 32542635 ~ 32543676 (+)
G44620 NA non-coding upstream 601995 32286014 ~ 32286159 (+)
G44860 NA non-coding downstream 166212 33083728 ~ 33088760 (+)
G44861 NA non-coding downstream 171300 33088816 ~ 33090427 (+)
G44865 NA non-coding downstream 176786 33094302 ~ 33095508 (+)
G44867 NA non-coding downstream 182958 33100474 ~ 33100687 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding downstream 185123 33102639 ~ 33102873 (+)
AMCG00013478 NA other upstream 432468 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 487702 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 603203 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 976353 31901530 ~ 31911801 (+)
G44325 NA other upstream 2110985 30776851 ~ 30777169 (+)
G44870 NA other downstream 188776 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 459004 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 524878 33442394 ~ 33449093 (+)
G45029 NA other downstream 778076 33695592 ~ 33699545 (+)
G45072 NA other downstream 1197157 34114673 ~ 34114939 (+)

Expression


Co-expression Network