AMCG00013505


Basic Information

Item Value
gene id AMCG00013505
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33056761 ~ 33061280 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013505
ATGCCCAGCACGCTGTTTCAGACCCCACCGAAAAAACAGGACTTTCCAAAGCATGGCCTGTCGCCGTCACTGAGAGACATGGAAGCCAAACCACAGTCGATCAAGAGCCTGAAAAGCTACCCGGAGGCAGGAGGGAGAAGCCTGGCTGCTGCGGCGGGCGGGGACGGCGGAGGGGGTTACCGTGCCAATGCGGAGGTGGAAATGGAGTCTAAAATCCAGAAAGCGGTGGAGTTTAAAGTGGAAGGCAACCGCTGCTACAAGGAGAAGAAATTCCGGGAGGCGATCGGGAAGTACCACCGGGCGCTGCTGCAGCTCAAAGGGGTTCACGTCGGAGAAGGGACTACGGGCTCCGAGCTGAATCTGCTGAGCGAAGCCAACAGCACGCCGACGGAGGAGCAGAGAAGACTGATTGAGAGCACGGAGATTGAGTGTTACGACAGCTTGACCGGTGTGGGGAGCCACCAGCCACATGTGGAGAAACACTGCAGCTCCTTGGGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013505 True 501 mRNA 0.58 2 33056761 33061280

Neighbor

gene id symbol gene type direction distance location
AMCG00013504 NA coding upstream 11407 33032612 ~ 33045354 (+)
AMCG00013501 NA coding upstream 34961 33015315 ~ 33021800 (+)
AMCG00013502 NA coding upstream 60677 32977931 ~ 32996084 (+)
AMCG00013499 NA coding upstream 92819 32951315 ~ 32963942 (+)
AMCG00013498 clasrp coding upstream 109048 32927816 ~ 32947713 (+)
AMCG00013503 ttc9b,LOC107096866,LOC103357803 coding downstream 19457 33080737 ~ 33083411 (+)
AMCG00013509 NA coding downstream 131355 33192635 ~ 33239625 (+)
AMCG00013510 NA coding downstream 211446 33272726 ~ 33284978 (+)
AMCG00013512 numbl,LOC106535595,LOC101072040,LOC106965209,LOC103154637 coding downstream 268031 33329311 ~ 33347695 (+)
AMCG00013514 NA coding downstream 390737 33452017 ~ 33464680 (+)
G44790 NA non-coding upstream 218918 32837315 ~ 32837843 (+)
G44769 NA non-coding upstream 298381 32756738 ~ 32758380 (+)
G44747 NA non-coding upstream 401059 32655503 ~ 32655702 (+)
G44702 NA non-coding upstream 513085 32542635 ~ 32543676 (+)
G44620 NA non-coding upstream 770602 32286014 ~ 32286159 (+)
G44860 NA non-coding downstream 22448 33083728 ~ 33088760 (+)
G44861 NA non-coding downstream 27536 33088816 ~ 33090427 (+)
G44865 NA non-coding downstream 33022 33094302 ~ 33095508 (+)
G44867 NA non-coding downstream 39194 33100474 ~ 33100687 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding downstream 41359 33102639 ~ 33102873 (+)
AMCG00013478 NA other upstream 601075 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 656309 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 771810 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 1144960 31901530 ~ 31911801 (+)
G44325 NA other upstream 2279592 30776851 ~ 30777169 (+)
G44870 NA other downstream 45012 33106292 ~ 33106595 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 315240 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 381114 33442394 ~ 33449093 (+)
G45029 NA other downstream 634312 33695592 ~ 33699545 (+)
G45072 NA other downstream 1053393 34114673 ~ 34114939 (+)

Expression


Co-expression Network