AMCG00013506


Basic Information

Item Value
gene id AMCG00013506
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33130054 ~ 33143388 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013506
ATGGCGTCAATAAGAAGAATCGTCCCAGAATGGAAAACACTTCTCCCTCAGCTGAAACAAAAGATCCACGTTTCTCAGAAGGGTGGCTCACCCGGACGGCtggaggcagaggaggaagCGGTGTACGTGGATGCCAGCCCGGCCATGATATTCCATTTCAGGTGCGCCCCAAACTACCTGCGCTGCCTCACAACGTTCACCTCCGGCGGCAGCAACGTGACGGTGGGCTTCCTCTGGGGCCACAGGCTGGAGCAGCACCAGATGGATGTGTGGATTGAGGAGGAGCAGGGGCCAAGGCATAACCAGAGCTTCCCCCTGGAGATGGACTACCTGGTGGAGCGGCTGCTGTTCGTCCCCTGCCAGCGGCTGTTTGTGGGCTACTGCAACGACCTGGCCCTGCGTCTGTACGGGGACCTCAAGCAGGAGATGTCGCTACTGTATCGCGCAGACTGCCCCAGCTCTGTGTTTAGCCTGCACTACAGCCAGGAGAGCGGGGAGATCATCACCGGGGGCGTGGGGATCATTGCCTTCTGGAGCTTCTGGCCTAGCCCCCGGCAGATGATCGGTGTGACCCACGTGCTGGACTGGACCTGCTGCTCCCTTGAGCGGGGCACCTTCATCAAGTGCCTGgccacagagccacagtccttctCCCTGTACGCCCTGTGCGACGCTGCCGTCAAAGTCTTCAACTACCAGAGCAAAGAGGAGATGCAGCCTTACTCCGGCACCAGCAGCGGCACTCTGCTCTGCTGCTCCCCCTGCTGGGTGCAGCGGTACCTGTACACTGGAGACTCTGCAGGTCATGTGCAGGTGTGGAGCcgagacacacacagcctgctgCAGGAATTCAGGGCCCACTCCCGGGGTGTGACCGACCTGGCGTTGTGCCTGGCCGGCCACAGTTACCTCACGGTCTCAGCGGATGGCTGGCTGAAGGAGTGGAGCTACTCCGGGGAACTGCTGCATAAGCTTTTTGTGGACGAGGCAGGGCTGCAACGGATGTGCCAGCTTGGCAATGACCGGGTCCTGCTCCAGGGTCCCTGCGCCTTCTCCATCTGGAAACTGTGCAGCATCTGCAGCCTCTTCAATGCCACTGGCTGGCCCCTGCGCAGGATCTCCCGGGTGCAGGCCGGGCCAGGCCGGGCCAGGCTGCTGGTGATCACGCAGGATGGCATTGCCTGCCTGCTGTCCCCTGTGACGGGGGAGATGCTGCTCCTCTCCTGGCCCTTCCTACTGCTGGAGGAGGCCCTGGACTACGCCTACGACCTGAGAAGGGAGGAGCTGTTTGTGGCCACGGGGTCCCCTCATGTCTTGGTGCTGGACACCTCCCGCTGTCCATGCCCAGCCAAACACTTCTTGGTGACATCCAGGGAGTGGGATGATGGGGTGCTGTGTCTGGAGGCTGTGACCCTGGGCCCCCTCTCGGCCTGCCCTCCCTGCCTGATCTTTGGTGGCCACAAGAATGGCAAGATCGGCCTGCTGTCACCCCAGAAGCAGAGCGTTCCGTCTCAGAAGGCCCACAATGGCGCCATCCTGCAGATGAGCAgctgtgtgttgggggagggggatcAGGCCCAACTGTGCTGCTATGGCACAGACCAGCAGCTCAGCGTGTGGGCGGTCCGCCAGAGAGAGCACCTAGTGCACCTGCTGCCCATGGCACGCATCCCCTGCTCCCAGCCGCTGCTTCTCACACAGCTGCTCCCAGGGCAGGTGTGCGCGGTGTCTCAGGACAGCACCCTGATGTTTTTCAGCTTGACAGGGGGCTGTGCCCAGGCCGAGAGGCCCCAGACTCCCGAGATCACATCCCTGGATTACTGCGCCTCCCTGGGGGTGATTGTGACAGCAGGGCCCCAGGGGATGATTGAAGTGTGGGACTCGGATGCTAAATTGCTGGCAGAGATCAGCCTAGGGGAGCCGCTGAGCCACGTCTGCTTTGCCAACCCCCGGGGTGACCTGCTGGCTAACTTCCACGGCCACACCTACCTCATCCTCAGTGTCCACTTCCTGCCACCACGCTTCCTGAGCGCCCTGCTGTTCCTGGACTTGCAGGACGATGCCACAGAAGCCCCCCTGCCATTCCAGCTAGGCCCTCCTGACACCTGCTGTGAGCTGGTCTTCATTCCCAGGTACCACTTGGACCTCCTAAAGGAGGACAAGGAGCAGCAGCCCAGCCCTGAGGCCATCGCCCCCTGCATGAGCACCACACCTGTGAGACCAGCCAGTATTGTCAGACTGGTCCAGTGGAGGCAGAGGGAGACGGAGGCACTGCAGCCAGCCTTTGTCAAAGCAGGTGAAGGGAAGGAGGACTCAGTTTCAGGAGTCCCTCTAGAGCCAGAGAGACAGGCCTCTCTCCAGGCGAAGGAGGAGGCAGTGTTGGAGGACACCATGCAGCAGCAGAGTGCACCCAACACCCAGACTGTAGACCTGGGCCAGGTTCTCCAGCTGTTGCCCATTGCTGATGGCTACATCCCCAACTCTGTGATAAGGGCCTGGGGGCAGCAGGAGGGGGTCAACAATGATCAGGACAGCGcagacaaaatgtttttcatccaGAGTTTGGAAAAGCTGCCCCGTTCCTCAAGAAAGGTCCACTCCCAGAGCTCATACAACTTCTTACTGGATGGAGACACCAAGTGGAGAAAGGTGGAAGAGGGTCAGAGCTCAGGAGGCGACTCAACAGAGATAGATTTGCTCACCCAGATCGCCAACAGCCTGTGGCTCGCCAAGAAACCCAGGGTACTTGACTGGGAGAACATGATCCGGGCGCTGCTGGACACCATGGCCCTGTCCTCTTCTCAGGTGTACCAGCAGTGTGAGGAGGCCTTGCTGAACATCATGCATACCTACAGCATCCCACCAGCACTCCGGGACACCATCCAGAGGGGCTTGCTGGGCCACACCAGACTGGAGGAGCCCAACTGGAAGCGCCTGGAGGGCTGGAGGAGCCTGGACCAACTCACCCTGCTCTCCCTAGAAACCTTGCCACAGCTGGCCCAGGCCCTGATGGACCCCAGCCCTGCAGTGGACAGGCTAGCCAGGGCGCTCCTGCAGAAATGCTCCCAGGTCTCCTCACAGCTCCTTCAGAGGGTACAGGACTGCTTGACCCAGCAGCTGGACCTGGACACAGGCACCCCCTCCCCAGACCAGTCACACCCCCCTGCAGactggcagaaaacagacaGCCAGGATTGGGCCTCAGAAGCAGCAGACAGAGAGGGCGAGGCTGTCCCTGTGCAGAAGCAGAGGCCCCTGCGTGGGTGCGGGCAGGCGGGGAAGCTGGGCAGGAAATATTTCCCTGTCCTGCAGGTCTATGTCAAGAAGGCCCGGcctcagcagcagctccagaaGAACCTGATCAAACCAATGAAGGAGGTGGAGTTGGGCAGGAGGGTACTGAAGCCTATCCCACTGCCCACCCCCTGGTACTCCAGGGTGGCCTCCCTGAGTAGCCAGGGCCCCTCTCTACTGAGCAGCCAGGCAGGACCCTGCCTCTCCATTCCAGAAGGGGACCCCCCTGATTTCAGCTGGGGGAGCAAGGTGGAGCCAGGGCCAGACAGGGACCCCAGGAACTGGAGGGCCAACCTATACAAACTCACCTCCCTCTATGGCTTCCGCTCCCCCAGGGCTCAGAAAGGGGCACCTTTGTTGCTGTACCATGGCCAAACCCGCTCCGTTACCCTGCCCAGGCTTACCCCTCCGCCCATGAGTCACGACCCCCTCCCTGGGCAGAGGGTCTTGTGCAAGGTGGGGGTGCAGGACCCCAGGGAGAAACACCCGTCCCGCTTCCAGCATGAGCTGCCCCTGCCCTGGCAGCTCAACAGCCTCACCCTCACGCCCCAGGGAGAGAGCGACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013506 True 3861 mRNA 0.61 7 33130054 33143388

Neighbor

gene id symbol gene type direction distance location
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding downstream 7183 33121972 ~ 33122871 (-)
AMCG00013507 NA coding downstream 21558 33096639 ~ 33108496 (-)
AMCG00013496 NA coding downstream 293456 32833847 ~ 32836598 (-)
AMCG00013489 NA coding downstream 509116 32609881 ~ 32620938 (-)
AMCG00013483 NA coding downstream 548751 32572426 ~ 32581303 (-)
AMCG00013511 NA coding upstream 102776 33246164 ~ 33263876 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding upstream 211193 33354581 ~ 33366875 (-)
AMCG00013517 NA coding upstream 285717 33429105 ~ 33440936 (-)
AMCG00013527 NA coding upstream 413643 33557031 ~ 33576604 (-)
AMCG00013528 LOC107709035 coding upstream 452942 33596330 ~ 33609620 (-)
G44872 NA non-coding downstream 34636 33094397 ~ 33095418 (-)
G44864 NA non-coding downstream 39607 33088902 ~ 33090447 (-)
G44862 NA non-coding downstream 73191 33056653 ~ 33056863 (-)
G44848 NA non-coding downstream 98799 33028267 ~ 33031255 (-)
G44815 clasrp,LOC102789808 non-coding downstream 191881 32934067 ~ 32938173 (-)
G44936 NA non-coding upstream 199621 33343009 ~ 33348520 (-)
G44940 NA non-coding upstream 272145 33415533 ~ 33416219 (-)
G44941 NA non-coding upstream 272908 33416296 ~ 33422111 (-)
G44995 NA non-coding upstream 445202 33588590 ~ 33590089 (-)
G45007 NA non-coding upstream 472020 33615408 ~ 33615642 (-)
AMCG00013488 NA other downstream 502150 32622153 ~ 32627904 (-)
G44719 NA other downstream 562102 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2387411 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2643723 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2647728 30468630 ~ 30482326 (-)
AMCG00013518 NA other upstream 325461 33468849 ~ 33501747 (-)
G45037 NA other upstream 534836 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 549456 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3735805 36879193 ~ 36885493 (-)
G45468 NA other upstream 3815789 36959177 ~ 36959914 (-)

Expression


Co-expression Network