AMCG00013510


Basic Information

Item Value
gene id AMCG00013510
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33272726 ~ 33284978 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013510
ATTGAACCAGCCTTTTCCGGGATCATTGTATTACAAAATAGCAGCGGCGGCCTCATCGCCAGTGAAGGACGGAAAGGGGTGTTTTTACTATTTCGTTACTTGtagtgcatttaaaacaacaacaacaacaacatgagtCAATGCACTGGTATTAAAGACAGATTGTAGTATACGGGTCTTTTTCTGTAGCTGAACTGCAGGTCACGGGATTTAGGAACCAGCCATGTGGGTGGAGGTGCTCCAGGTGCTGCGCGGTGCGGGCAGAGTAGGCGTGGCCTTTGCCGAGACCCAGGGGGAGCTGCTCCGTATGGTGGCCTGTAACTCCAGCCTGGGTGGCGGTTTGAAAAGGGCACAGGAGGGTCTGGAGGTCTGCCTGACCAGCCTGCTGGCACACAGGGGGAGAGGAAATCATGAGTTCCCAGAAAGCTCGGCCTGGGAAGAGATGGACAATGAAGAGGAACTGGCTAAGTGGACAGTGGGCTCTGAGCTTGCCCCTGAGTCCAGTGACATAGAGAGCCAGGGAGCCGCCCAGGCCCAGCAGCCATCCCAGGGTCTGTCCCAGCAGGCTGCGGGTCCGGGGGTACAGGGTGGCAGAGGAGGGCTGGGTGGTACAGGACTGGGGCAGACTGCCAGGCACTACCACCAGGACTCAGTGTTGGGCAGACTGACAGCAGAAGACATCAAGAAAGCCAGGGAGGCCAGACAGACCGCAAACAAAGGGCCCACCTACAGACTTGTCCGACAGAAGCTGAGCGATCATGCCAAAGAAAATAAGGTTCCGGTGTCCAGAATTAGTCGGCTGGCTAACTTTGGGGGGCTGGCTGTCGGCCTGGGGCTGGGTGCGATAGTGGAAGCTGCCAAGCAATCTTTTGGAGGGAAACAAGCCACAGGCCAGGGGGCATTGCTGGACACCCCCTTGCTTTCCGAAGCCAACGCAGAGAGGATCGTACACACGTTGTGCAAAGTCCGGGGAGCTGCACTGAAGATCGGCCAGATGCTCAGTATTCAAGacaACGCTTTCATCAACCCCCAGTTACAGAAGATCTTTGAGAGGGTCCGGCAGAGCGCGGACTTCATGCCGACCTGGCAAATGACCAAAGTGCTAGCAGAGGAGCTCGGGTCAGACTGGAGGGATAAGCTGGAATCCTTTGAGGACAAGCCCTTTGCCGCTGCCTCCATCGGACAGGTGCACTATGGGGTGCTAAAGGAAGGCAGAGAGGTGGCCCTGAAAATCCAGAGGGAGCTGGAGTGGGAGTGTGATTACAGAAGAGAGGCTGAGTGTGCCAGACGCTTCAGGAGGCTCCTGGAGGGAGATTCATACTTCCGGGTGCCAGTGGTGATGGACGAGCTGACGACAGGCAGGGTGCTGTGCATGGAGTTGGTGTCTGGAGAGCCTCTGGACTGCTGTGTGGATCTGGACCAGGACACTCGCAACCAGATCTGTTTCAATATCCTGCAGCTGTGTCTACGCGAGCTCTTTGAGTTCCGCTTCATGCAGACCGACCCCAACTGGTCCAACTTCTTCTACGATGCCGAGCAGAACAAGGTCACCCTCTTAGATTTTGGAGCATGCCGTGAGTACAGCCAGAAATTCACAGACAACTACATTGAGGTGGTGCACGCGGCCTCTGTTGGAGACCGGGAGACCATCCTCCAAAAATCCAAGGACCTCAAGTTTCTCACCGGCTTTGAGAGCAAGGCCTACGAGGAGGCCCATGTGGACGCAGTGATGATCCTGGGAGAAGCCTTTGCCTCCCGGGAGCCCTTCAACTTCGGGGCCCAGAGCACCACACGCCGCATCCAGAACCTGATCCCCGTGATGCTTCGGGACCGCCTCACTCCCCCGCCCGAGGAGTCCTACTCCCTGCACCGCAAGATGGCCGGCTCCTTCCTTATCTGCTCCAAGCTGGGCGCCGTCATCCCTTGCCAGGAGATGTTCCACTCCATCTACCTCCGCTACCAGCAGGGCCTCCGCACCAGGGCCTAGAGAGTccgacaggcaggcaggcaggcaggcccCGTCCCCTCCCAGGTGCCTAAgtcaggggagggagggagcaatGGCGGATACATGGCAGCTTGGGAaatgtgtgtgagggagagtcTGTGTCTGCATTGATTCATGCAGACAGATTCAATGTGTAACAGGTGTGATGATGCGAGGGGGGATGTGAGTGACTCAGTGTAGCCTGGGTCCCATAGCATTAACGTGCCAGCTCAAATTCACACTGTGCCACCTGATGTGGGATCAGGAAAAGGTCAGGAtttgggagggagaggggggagaaGGGGTCAGctatggagtttttttttttttttttgggggggtcaTCTTTGACCAGTTGTGCAGTAATGGTAGTCATCTAGAGTCTAGATTCTAGACTGTCTCCATCAGTCAACCCAAGCCAAAGTGCGTTCCCTGCACATCCTGCCAGTAAGCTTTTTGAAATTGATCGTGAGGAAGCTAGGATTATGTAAAGTCCCGGGTCAGGGGCCTGTTTTTTTCTCTACGGGATCTCCTGACACCACATCTTCCACATCCTTCTCTGTGGTCACTAAGGGCAGAACTGCTGGTGAGACAAACCATTTTTAACTCTACCAGAGTGTGGGCTTTCTgctgtggtgttttttgttttgtttttcgttcTATCAAAAATGCTGGAAATCCAGATTCTTTTAAGTTAATACCGAAGCCTTCTtgagtgtgttttatttgtcacAGGGATAGTGAACAGTACACAAGGGCCTTTCTTCCGCTCACCTCTCTGGGGTGTTTTGGCATCTTAGGCtgctgtaagtgtgtctgtgtgtgttgtggtacTGTATCTCTCATGCTCGGTCATGGCCTGTAGattgtttttgattgtgttCTGTAAGCATGCTGTACCTTAATAAAAC

Function

GO: NA

KEGG:

id description
K08869 ADCK, ABC1; aarF domain-containing kinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013510 True 2898 mRNA 0.54 14 33272726 33284978

Neighbor

gene id symbol gene type direction distance location
AMCG00013509 NA coding upstream 33101 33192635 ~ 33239625 (+)
AMCG00013503 ttc9b,LOC107096866,LOC103357803 coding upstream 189315 33080737 ~ 33083411 (+)
AMCG00013505 NA coding upstream 211446 33056761 ~ 33061280 (+)
AMCG00013504 NA coding upstream 227372 33032612 ~ 33045354 (+)
AMCG00013501 NA coding upstream 250926 33015315 ~ 33021800 (+)
AMCG00013512 numbl,LOC106535595,LOC101072040,LOC106965209,LOC103154637 coding downstream 44333 33329311 ~ 33347695 (+)
AMCG00013514 NA coding downstream 167039 33452017 ~ 33464680 (+)
AMCG00013520 NA coding downstream 232177 33517155 ~ 33521234 (+)
AMCG00013519 NA coding downstream 252241 33537219 ~ 33538322 (+)
AMCG00013523 degs2,LOC106603795,LOC105011018 coding downstream 297576 33582554 ~ 33585179 (+)
G44871 map3k10,LOC102787573 non-coding upstream 147277 33122020 ~ 33125449 (+)
G44869 NA non-coding upstream 169334 33103167 ~ 33103392 (+)
G44868 map3k10,LOC107554498,LOC107560156 non-coding upstream 169853 33102639 ~ 33102873 (+)
G44867 NA non-coding upstream 172039 33100474 ~ 33100687 (+)
G44865 NA non-coding upstream 177218 33094302 ~ 33095508 (+)
G44954 NA non-coding downstream 154857 33439835 ~ 33441164 (+)
G44983 NA non-coding downstream 247794 33532772 ~ 33533155 (+)
G45100 NA non-coding downstream 1648228 34933206 ~ 34933787 (+)
G45108 NA non-coding downstream 1765879 35050857 ~ 35057957 (+)
G45124 NA non-coding downstream 1835101 35120079 ~ 35120344 (+)
G44870 NA other upstream 166131 33106292 ~ 33106595 (+)
AMCG00013478 NA other upstream 817040 32423276 ~ 32455686 (+)
AMCG00013477 ppp1r37 other upstream 872274 32393818 ~ 32400452 (+)
AMCG00013473 LOC105911162,LOC105012052,LOC107580644,LOC107566293,LOC107577119,LOC107725066 other upstream 987775 32273268 ~ 32284951 (+)
AMCG00013468 NA other upstream 1360925 31901530 ~ 31911801 (+)
AMCG00013515 dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 other downstream 91542 33376520 ~ 33412841 (+)
AMCG00013516 NA other downstream 157416 33442394 ~ 33449093 (+)
G45029 NA other downstream 410614 33695592 ~ 33699545 (+)
G45072 NA other downstream 829695 34114673 ~ 34114939 (+)
G45174 NA other downstream 2049912 35334890 ~ 35338052 (+)

Expression


Co-expression Network