AMCG00013517



Basic Information


Item Value
gene id AMCG00013517
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33429105 ~ 33440936 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013517
ATGACACAGTATTTGGAGGCTGGGAACTCTCTGCTGGGCTGCCAGGCCATGTTCTGCACAAGTCCCAGTAAGCCTGGCATGAATGAGCACCACATCAAGATGGAGGAGTACTGTGGACTCCTGACTACTAAACAGATGCCCGtggcTCTGAAGGCCGTGTCAGTGGAGGTGACAGTGCGAGGCTGGCTGGCTGAGTTCTCCTTCACCCTGGAGTACGAGAGCAGGGAGCCCCGCCCCGCTGATGTGTTCTTCCTGTTCCCCACGGAGGGCAACTGTGTGGTCACTCACTTCCTGGCCCAGATTGGGAAGACGGAGATGGAGTTTGCCCTTGAAGAACAATTCAAGGCCACAGGACTTTACAGGTATAATGCGCATAATGGCTTGCACCTGTGCAAGAATCAGGAAGGCCCTGACCTGTTCCGGCTCAGTCTGGGCAGCCTGGCCCCTGGGGGGATCGCCTCTATCCGTCTGTCCTGCATCACCGAGCTGTCTGTCCAGAGGGGGGCTGTGCAGCTCAGTCTGCCCACTATCATCAGCTCCCGCTGCCCCCCTCCAGACTCTGACAGTGTGCCAGCTGAGCCCTCTGCCTCTGGTGGGGGGGTGCCCTCCAGCCTGTCTCTCAGTGCCCACATCATCTTCCCCAGCGGCATTGACACAGTGCGGGCCAACTGCCCCCTCAGCCCCCTGGAATACCTCACCCCCGACCACACACAGGCCAGGACTCGTTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013517 True 729 mRNA 0.60 7 33429105 33440936

Neighbor


gene id symbol gene type direction distance location
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 62230 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 165229 33246164 ~ 33263876 (-)
AMCG00013506 NA coding downstream 285717 33130054 ~ 33143388 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding downstream 306234 33121972 ~ 33122871 (-)
AMCG00013507 NA coding downstream 320609 33096639 ~ 33108496 (-)
AMCG00013527 NA coding upstream 116095 33557031 ~ 33576604 (-)
AMCG00013528 LOC107709035 coding upstream 155394 33596330 ~ 33609620 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 1091494 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 1103141 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1550946 34991882 ~ 34992115 (-)
G44941 NA non-coding downstream 6994 33416296 ~ 33422111 (-)
G44940 NA non-coding downstream 12886 33415533 ~ 33416219 (-)
G44936 NA non-coding downstream 80585 33343009 ~ 33348520 (-)
G44872 NA non-coding downstream 333687 33094397 ~ 33095418 (-)
G44864 NA non-coding downstream 338658 33088902 ~ 33090447 (-)
G44995 NA non-coding upstream 147654 33588590 ~ 33590089 (-)
G45007 NA non-coding upstream 174472 33615408 ~ 33615642 (-)
G45010 NA non-coding upstream 180516 33621452 ~ 33621738 (-)
G45035 NA non-coding upstream 229807 33670743 ~ 33671683 (-)
G45038 NA non-coding upstream 241887 33682823 ~ 33683081 (-)
AMCG00013488 NA other downstream 801201 32622153 ~ 32627904 (-)
G44719 NA other downstream 861153 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2686462 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 2942774 30483305 ~ 30486331 (-)
AMCG00013412 NA other downstream 2946779 30468630 ~ 30482326 (-)
AMCG00013518 NA other upstream 27913 33468849 ~ 33501747 (-)
G45037 NA other upstream 237288 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 251908 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3438257 36879193 ~ 36885493 (-)
G45468 NA other upstream 3518241 36959177 ~ 36959914 (-)

Expression



Co-expression Network