AMCG00013527


Basic Information

Item Value
gene id AMCG00013527
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 33557031 ~ 33576604 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013527
ATGCATGCGTGGCGGCGCTCCTGTCAGCGGAGGTCCACTGGAGACGCGTTCACCTCGAGTCCTCCGACAGCTCTTAACATACACGGCTCTTACACCCACCGGGCGACTGAGGAAGAGAAACAACCTGCAACGTACCGTTACTttgatgcacacacacacacgctgtatAAAGGGAGATCGCTGTGCAGCCAGGACACTTCGGAGTCCATTGGTGCAGTGGTGTGTCACAAGAGCATTCCCCAGCACAGCGTGGCGAGGCTAGGCTCTGCCACAAGCTCCCTGAACAGCCTGAAGGGCAGCCCCTGGGCTTTGATGACTGCGCTGGAGCAGCAGGTGGGGGAGCTAAGGGTGGACACTGAGACCGCCTATGCCGAGCCCCCCTCTGATGTGGGAGACAGCCGGCCCAGCTCAGGTTTTTATGAGCTCAGCGAAGGCCCCTCGCCCGTTGGCCTATCAGATTCCTCTGTCTTCAGGGAGTTCCAGGCCAGCTACtcacggggtgggggggtcgcTGAGGCCCGGGTCAACTATGCCAGTGAGCGGCCCAAGTCTGTAGGGGATCTGTTTGTGGCAAACCGGGAGGGCTTGCTGGACAGCGGTCCCCGATCGATGGTGCCCCGCTCTTTCTCCGCCCCCTACCCCCGCTCCCTGGAGGGCATTTCAGAGGGGACCGTGGCTGAGGAGGACCACTGGCCCTGGGAGTCACCCTACCTGGGCGGCTTCGAGGAGGAGCAGCTGTACCCTGGGGAGCAGCTCACACCGGAGGACATCCAGCAGGCCCACCGCGTGGAGACCTACATCCTGGGCCTGATCCAGAGGAGGGTGCTGCCCCTGCGCCCGTCCAAGCCTCGCACCAGCTTCAACTCTGATCCTCATAAAGGCCTGGCTCGCCAGAACAGCCTGTGCCGGAGACCCCCGGAGCCTGTGTACCCTCAGGGAGGCCACAGCGCTGTGTCCCCCAGTTTCGAAGTCCCCATGTGGGGCTGCAGGAGCCTGGATGAGGACGATTATGTTGGAATGCCCCTGAACTCAGAAGAAAGTCTCTCCCTCCTCTACTCCAGGCCCAAACCTGCACCTTTAGCTGCGGTGCGGCCAGCCTCTCTAGACTACCCTTGCAGTGCCGCTTTGGAGCCAACCAGCAGTGAACCTGAGTCTCCAGAGCATTACCAGGGGTACCCAGTGCCCAGGTCACCGCCCTCGGATGACCAAATGGTCAGCGCCCAGTACATCCCAGCCCAGCAACCTTGTCGAGCCCAGCAGTCCGGCCGCAACCCATCACAGAGACCCCCGGGTAAGTCTGGGAAGAGCCGGGTAGAGGTGCCCCGGTATTCCCCAGAAAGATGCCACCCCAGGCCTAAAGGCACCCCGAAGAAGTGCCGCTTCACCGAAGAGAAACAAGCGCCCCGAAAGCCAGGAAGGAAAGCCTGCCGCTCCCAGTCGGAGAACAGCCTGCTGGGCCAGAGGGTGGCACTGGAGCGTAAGTACAACACTGTGGACCGGGATGGGGGTGCTAGGGGGTGCCAATCCAGGCCCAGGCGCCAGCAAGCAGGGACCACCGGCTACCGCAAGTGGCGCTCCACCCTGGAGATCAGCCAAGACGAAGGGGAGATCCTGCCAGGCAATCAGGCCCCCAGACGCTTCCGCAAACCTCGTCAGCCCCCTCAGTACCCCTACAACCACCCCCACCCCGATGTTGACTTCCAGGAGCGGGCCCCCATCTGCCGGCCCGAAGACGGCTACCCCGCACCCTGCCTCGGAGACTCTGAGTCTAGCCTGAGCGAGGCTGACTCCCCCGGCTCCAGCTCCCTCTCCAGCGACTCGGACGAGAGCGGGGGCCTGGTGTGGCCCCAGCAACTGCCCCCGCAGCTGGTCggaaccccctcccccacctccccaccaTGTGGCCCCCCACCCAAAGCTTTCGTCAAGATCAAGGCGTCCCATGCCCTAAAGAAAAAGATCCTTCGGTTCCGCACTGGCTCCCTCAAGGTCATGACCACAGTGTGAGAGGCCCTCTCCTGAGCTCCACCACACCCACCCCCCTGGAGAAAGCGTTCGCAGAGAGAGCTCGCAATTGGGCTGGAGACTTTAATATCAATCTATTCTCAAAGGGGTCAAAGCCTCCAACCCAGAGTATAAAGAAATCCCAAAAGCTCAGGAGCTGCCATGTTTTGAACCCCCACACCTGGCCCTTCATTGACCGATGCTGGACCAAGCCCCCCCGAGCACACTGAGTAGGTGAGTCGGCAAGGGATGGAGGATCTTCAATGTGCCAAATCACAGCAACAACTCCGACTGAATTGGGCAGTCGGGGACCACTTCTGACCCTTATTCCAAGAGCAAACCACACTTTCTTCAGCATGACAGTGCTGCCATTACTCCCGATGTAAAGCCTTTTCAATGGGGTCACTCCCATCACCAGCTTTTGATGCTCTTCCTCGCTGTTGTTCTACCACACGATACCTTCAATGGGAATGTCGGTAATAAGTTACTAGTGGCGATTCAATTGACTCATGAGTTGACCCATTTAATGTGCCAATCAAAAGCCAATAAATCAATAGCTAATGGATATTGTATGAAAACTATGCCATGTGGACAGAGTCTGACTCTTCTCTGCAGGCTGCAGTTTGTGTATTGGTTGAATGTCAATTAAATATACCAGAGCTTAGACCTACAGCCAGCGTGAACTCTTGATGATCAGCGGGGAGCGGTCGATGGCCCCTGTGCTGCTAGACAACCGATCTCCCTGACTGTATGCCAACGAAGTCCTAACCGTTGCTGCTGATCTGGGGGGAGAACGCCCAGACCACGAGGAGCAACTGATCCGATACCAACACGCTACGCCACTGCCAATGCTATTGCGCACCTGCGGGTGAGGTCTCGAGTTGTGTTTTGAGAATgttctgtttgtatttattgcctCGGTACAATGATGTCCTCTAGTCCTGGCGTCTGTACGGTACTGCCACACCTGTATATATACCTGTACATACCTTTCTGTGGCCTTGTATTTATGAATGTGGACTGTAAATAAAACTGGTGATCTTTGACACAAGA

Function

GO: NA

KEGG:

id description
K22154 DACT; dapper

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013527 True 3057 mRNA 0.58 5 33557031 33576604

Neighbor

gene id symbol gene type direction distance location
AMCG00013517 NA coding downstream 116095 33429105 ~ 33440936 (-)
AMCG00013513 LOC106580829,LOC106612625,LOC105026889 coding downstream 190156 33354581 ~ 33366875 (-)
AMCG00013511 NA coding downstream 293155 33246164 ~ 33263876 (-)
AMCG00013506 NA coding downstream 413643 33130054 ~ 33143388 (-)
AMCG00013508 map3k10,LOC102787573,LOC107756783 coding downstream 434160 33121972 ~ 33122871 (-)
AMCG00013528 LOC107709035 coding upstream 19726 33596330 ~ 33609620 (-)
AMCG00013534 lrfn1,LOC106613031 coding upstream 955826 34532430 ~ 34544065 (-)
AMCG00013535 NA coding upstream 967473 34544077 ~ 34648703 (-)
AMCG00013538 NA coding upstream 1415278 34991882 ~ 34992115 (-)
AMCG00013536 NA coding upstream 1479013 35055617 ~ 35057435 (-)
G44941 NA non-coding downstream 134920 33416296 ~ 33422111 (-)
G44940 NA non-coding downstream 140812 33415533 ~ 33416219 (-)
G44936 NA non-coding downstream 208511 33343009 ~ 33348520 (-)
G44872 NA non-coding downstream 461613 33094397 ~ 33095418 (-)
G44864 NA non-coding downstream 466584 33088902 ~ 33090447 (-)
G44995 NA non-coding upstream 11986 33588590 ~ 33590089 (-)
G45007 NA non-coding upstream 38804 33615408 ~ 33615642 (-)
G45010 NA non-coding upstream 44848 33621452 ~ 33621738 (-)
G45035 NA non-coding upstream 94139 33670743 ~ 33671683 (-)
G45038 NA non-coding upstream 106219 33682823 ~ 33683081 (-)
AMCG00013518 NA other downstream 55284 33468849 ~ 33501747 (-)
AMCG00013488 NA other downstream 929127 32622153 ~ 32627904 (-)
G44719 NA other downstream 989079 32565760 ~ 32567952 (-)
AMCG00013425 NA other downstream 2814388 30730287 ~ 30742643 (-)
AMCG00013411 anapc11,LOC107553313,LOC106564932 other downstream 3070700 30483305 ~ 30486331 (-)
G45037 NA other upstream 101620 33678224 ~ 33678907 (-)
AMCG00013531 NA other upstream 116240 33692844 ~ 33699712 (-)
AMCG00013578 NA other upstream 3302589 36879193 ~ 36885493 (-)
G45468 NA other upstream 3382573 36959177 ~ 36959914 (-)
G45571 NA other upstream 3554254 37130858 ~ 37223824 (-)

Expression


Co-expression Network