Item | Value |
---|---|
gene id | AMCG00013528 |
gene name | LOC107709035 |
gene type | coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030125.1 |
NCBI id | CM030125.1 |
chromosome length | 49972098 |
location | 33596330 ~ 33609620 (-) |
genome version | AmiCal1_2021_bowfin_Genome |
description |
---|
PREDICTED: transcription factor Ovo-like 2, partial |
id | name | namespace |
---|---|---|
GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0046872 | metal ion binding | molecular_function |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | molecular_function |
id | description |
---|---|
K09216 | OVOL; ovo |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00013528 | True | 972 | mRNA | 0.66 | 5 | 33596330 | 33609620 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00013527 | NA | coding | downstream | 19726 | 33557031 ~ 33576604 (-) |
AMCG00013517 | NA | coding | downstream | 155394 | 33429105 ~ 33440936 (-) |
AMCG00013513 | LOC106580829,LOC106612625,LOC105026889 | coding | downstream | 229455 | 33354581 ~ 33366875 (-) |
AMCG00013511 | NA | coding | downstream | 332454 | 33246164 ~ 33263876 (-) |
AMCG00013506 | NA | coding | downstream | 452942 | 33130054 ~ 33143388 (-) |
AMCG00013534 | lrfn1,LOC106613031 | coding | upstream | 922810 | 34532430 ~ 34544065 (-) |
AMCG00013535 | NA | coding | upstream | 934457 | 34544077 ~ 34648703 (-) |
AMCG00013538 | NA | coding | upstream | 1382262 | 34991882 ~ 34992115 (-) |
AMCG00013536 | NA | coding | upstream | 1445997 | 35055617 ~ 35057435 (-) |
AMCG00013537 | LOC108246317 | coding | upstream | 1456629 | 35066249 ~ 35067931 (-) |
G44995 | NA | non-coding | downstream | 6241 | 33588590 ~ 33590089 (-) |
G44941 | NA | non-coding | downstream | 174219 | 33416296 ~ 33422111 (-) |
G44940 | NA | non-coding | downstream | 180111 | 33415533 ~ 33416219 (-) |
G44936 | NA | non-coding | downstream | 247810 | 33343009 ~ 33348520 (-) |
G44872 | NA | non-coding | downstream | 500912 | 33094397 ~ 33095418 (-) |
G45007 | NA | non-coding | upstream | 5788 | 33615408 ~ 33615642 (-) |
G45010 | NA | non-coding | upstream | 11832 | 33621452 ~ 33621738 (-) |
G45035 | NA | non-coding | upstream | 61123 | 33670743 ~ 33671683 (-) |
G45038 | NA | non-coding | upstream | 73203 | 33682823 ~ 33683081 (-) |
G45039 | NA | non-coding | upstream | 74769 | 33684389 ~ 33684898 (-) |
AMCG00013518 | NA | other | downstream | 94583 | 33468849 ~ 33501747 (-) |
AMCG00013488 | NA | other | downstream | 968426 | 32622153 ~ 32627904 (-) |
G44719 | NA | other | downstream | 1028378 | 32565760 ~ 32567952 (-) |
AMCG00013425 | NA | other | downstream | 2853687 | 30730287 ~ 30742643 (-) |
AMCG00013411 | anapc11,LOC107553313,LOC106564932 | other | downstream | 3109999 | 30483305 ~ 30486331 (-) |
G45037 | NA | other | upstream | 68604 | 33678224 ~ 33678907 (-) |
AMCG00013531 | NA | other | upstream | 83224 | 33692844 ~ 33699712 (-) |
AMCG00013578 | NA | other | upstream | 3269573 | 36879193 ~ 36885493 (-) |
G45468 | NA | other | upstream | 3349557 | 36959177 ~ 36959914 (-) |
G45571 | NA | other | upstream | 3521238 | 37130858 ~ 37223824 (-) |