Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00013545 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 35325991 ~ 35331505 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K10102 | FBXO27; F-box protein 27 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00013545 | True | 849 | mRNA | 0.46 | 5 | 35325991 | 35331505 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00013546 | NA | coding | upstream | 16436 | 35307364 ~ 35309555 (+) |
| AMCG00013543 | NA | coding | upstream | 108353 | 35214634 ~ 35217638 (+) |
| AMCG00013539 | med29 | coding | upstream | 184648 | 35138349 ~ 35141343 (+) |
| AMCG00013540 | gmfg,LOC105934520,LOC107090391,LOC103032687,LOC106520392 | coding | upstream | 196929 | 35118409 ~ 35129062 (+) |
| AMCG00013533 | NA | coding | upstream | 1241874 | 34081183 ~ 34084117 (+) |
| AMCG00013549 | LOC101074320 | coding | downstream | 475296 | 35806801 ~ 35814022 (+) |
| AMCG00013552 | NA | coding | downstream | 534280 | 35865785 ~ 35869903 (+) |
| AMCG00013556 | NA | coding | downstream | 567586 | 35899091 ~ 35908745 (+) |
| AMCG00013558 | sptbn4,LOC106612708 | coding | downstream | 765650 | 36097155 ~ 36111063 (+) |
| AMCG00013559 | shkbp1,LOC106612709 | coding | downstream | 788061 | 36119566 ~ 36132259 (+) |
| G45170 | NA | non-coding | upstream | 23210 | 35299872 ~ 35302781 (+) |
| G45162 | NA | non-coding | upstream | 45534 | 35279905 ~ 35280457 (+) |
| G45150 | NA | non-coding | upstream | 98962 | 35226828 ~ 35227029 (+) |
| G45135 | NA | non-coding | upstream | 150545 | 35175235 ~ 35175446 (+) |
| G45129 | LOC105030512,LOC106584099,LOC106569888,LOC106613431,LOC106573797,LOC106609167 | non-coding | upstream | 183462 | 35141422 ~ 35142529 (+) |
| G45207 | NA | non-coding | downstream | 219474 | 35550979 ~ 35551223 (+) |
| G45226 | NA | non-coding | downstream | 626602 | 35958107 ~ 35959584 (+) |
| G45227 | NA | non-coding | downstream | 636611 | 35968116 ~ 35968417 (+) |
| G45228 | NA | non-coding | downstream | 637164 | 35968669 ~ 35970696 (+) |
| G45229 | NA | non-coding | downstream | 641973 | 35973478 ~ 35973877 (+) |
| G45072 | NA | other | upstream | 1211052 | 34114673 ~ 34114939 (+) |
| G45029 | NA | other | upstream | 1626446 | 33695592 ~ 33699545 (+) |
| AMCG00013516 | NA | other | upstream | 1876898 | 33442394 ~ 33449093 (+) |
| AMCG00013515 | dpf1,LOC107561370,LOC107749650,LOC107672425,LOC102781105 | other | upstream | 1913150 | 33376520 ~ 33412841 (+) |
| G44870 | NA | other | upstream | 2219396 | 33106292 ~ 33106595 (+) |
| G45174 | NA | other | downstream | 3385 | 35334890 ~ 35338052 (+) |
| G45209 | LOC107575789 | other | downstream | 323797 | 35655302 ~ 35659833 (+) |
| AMCG00013560 | sptbn4,LOC107602096,LOC103155361 | other | downstream | 729250 | 36060755 ~ 36085843 (+) |
| AMCG00013566 | NA | other | downstream | 1006757 | 36338262 ~ 36370087 (+) |
| G45338 | NA | other | downstream | 1071849 | 36403354 ~ 36403901 (+) |
