AMCG00013567


Basic Information

Item Value
gene id AMCG00013567
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 36462852 ~ 36476392 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013567
TCTGATGGAGATTCGGAGGAAAGTCATGCTTTCATCAAGGGAAGAGAATCAGTAACTGGTGAGGTTAAGGACAAAGATCGCACTGCCCACTCAGAAAGGCCACACCCCTCTCACCACCCCCCAACAGCAGAGGAGCCGGAGAGCCCAGAAAGAGTGGAGGAAGTGGCCCGCTCGGAGCTGGTAGAGGTAGTTGTAGAGACGGAGGCGGAGGCTGGTGCCAGTGGATTCAGCGTGGCAGGAGGAGGGCAGGAAGGCATTTTTGTCAGAGATGTACTCAAGGATTCACCAGCAGCAAAATCTCTCAGCATGAGGAAAGGAGATCAGCTGCTCAGTGCAAGGGTGTACTTTGAAAATGTGAAGTATGAAGATGCTCTGAAGATATTGCAGTTTGCTGAACCCTACAAGGTGTCCTACTTTCTGAAGAGGACAGTGCCTGGAGCTGATATAAGTGTTTCCTCGGGCTCCGCTAGCCTGGATGTCAAGGGACCAAAAGCTAAGATGCCCCGAATGAGTGTCAAAAGCATCAAACCCATCaaagggaagaagaagaaaagtcGCTTCAGCCTGAAAAAGAGCAAGGAAGGCAAGGCCCCAGCCGCAGAGTTCAAGATGGAGGGACCCCCAGCTAAACTTGATTTCAGTCCAGTGGATGTGGAGTTTGCCTTTCCCAAGTTTTCTAAACTCAGGAAGGGCAAAAAGGCATCTGCAGAAGGTGGGGTGAAATTCACCGGCTCGGGTGCACCAGGTGGCATAGCAGTTGCCggcagaaagaaaaagagaatcAAGTTCCCCAGAATGAAAACTAAAGGAAAAGCTGCAGCTAAAGGTGATGTAAGTGTGGAAACCCCAAAAGCAGAAGCAAAAGTCACTCTTCCTGAGGGTAAGGCAGACCTGGATGTGCCTAAGGCCAAAGCCAAGGTCAAAGGGAAGTCCTCAAAGTTTGGGATCTCCTTCCCCAAAACCAAAAAGCCCAAAGTTGATGTAAGCCTCCCTGAGGGAGGTGTGATGTCCCCGGAGGTCAAATTCAAACCCCCATCAGTTGAACTGGACATCAGTCTGCCGTCagcaaaaaaggaaattgaCTTACCAGAAGtggaatttaaagaaaaagaaggatATAAATTTAAACCCCCCAAAGTGGGGCTTGATTTTGGTCTGCCATCAGGAAAAGGCACCTTGCCCAAGCCTGAAGTCGAAATAAAAGGCAAGGAAGAAGTTAAGTTTAAACCACCCAAAGCTGAGTTGGAAATTGGATTGCCTTCGGACAAAGTGAAAGGTCCCAAGGTGGATATCATGGGATACACTGAAGGTTCAGAAGGCACATCGAAAGGAGAAGGGTTTCACATTAAGATGCCTAAAATTGACGTCTCCACAAAAGCAGGGGGTGAAATTGAAGGCCCTGAGGGTAAGATGAAAATGCCTAAACTACCCCAGATAGAACTTTCCCTTCCCTCAGCAGAGCTTGAAGAAGCTGGAGCTGCAAGTGTTGAGATTCCAGaaggaaaacacaaagctgGATTAAAAATGCCATCGATAGACATTACTGCCCCCAAAGTAGACATTGATTTAAGCCTACCAAAAGGGAAAGCAGAGATTGAGGGAGAGGTGAAGTTGCCAGCAGCAGCTGATGAGGGCCTGAAGATAAAAATGCCAAGAGTAGAACTCCCAAAATTTGGAGGGTCAAAGGGTGACATGGAGTTTCAATTATCCCCTCCAAAAGTAGAAGGAGACATCAAAGGTCCCAAGATTGAGGCTGGAGAAATAGAAGTTGAAGGCAAAGGTCCTAAAATGAAGGTGCCATCCTTTGGAATTTCATTACCAAAAATGAAAGGAGAACATGCTCTGCCTGAAGCAGAAGTAACTCTTCCTGATGAAGGCAGCAAAGGAAAGATGAAAATGCCTGTCATTGATATTTCATTGCCTACTCCTGAAATTCACCTCCATCTTCCAAAGGGGAAAAGAGCAGGTGAATTGGAAATGAAAGGTGATTTGGAAGCAGGGAGTCAAGGAAGCAGAGAAAGACTGGATTTGAAGTTAAAAATGCCAAAGATACCTCTGCCAAAGTTTGGTGTGACAGGAAAGGTAAAAGATTCAGATACGGATGTACACGTTTCTGGTCCTAAAGTTGATGTGAAAGCCCCTGGAGCAGATGTTAAGATTCAGCAAATTGATATAGAGGGCCCTGAGGCTAAAGGTGCAAAAATAACTATGCCAAAGGTTGACATTTCATTACCAAAAATAAAGGCACCTGACACAGCTTTAGATGTCCATGGAATGGAGATTGAGGGACCTTCTTTTAAGGGGCCAAAAATATCAATGCCAAAAGTAGATATCTCCTTACCAAAAATAAAGGCACCTGAGGGGGATTTTGAAGGCCGTGGAATTGAAATAGAAGGCCCCAAGATAAGTATGCCTAAAGTTGATATTTCTCTCCCAAAAATGAAATCGATGGATTCTCATTTTGAAGTGGAGGGATCAGGAgccaagggggaaaaaataagtatgCCCAAAGTTGATATTTCTCTTCCAAAAATGAAGACTCCAGAAATGGACTTTGAAGTAGAAGGGCAGGGAGAGAAAGGGTCAAAGATAAGCATGCCCAAAGTCGATATTTCTCTACCGAAAATGAAATCACCCAAAATGGATTTTGAAGGGCAAAGATAAGTATGCCCAAAGTTGATATTTCTCTTCCAAAAATGAAGTTACCAGAAGTGGATTTTGAAGTTGAAGGACCTGGGGCTAAAGGGGCAAAATTAAGCATGCCCAAGATTGACTTTTCTCTTCCAAAAATGAAATCACCAGAAGTGGATTTTAATGTTGAAGGGCTTGGGGGTAAGGGAGCAAAGATAGGCTTGCCCAAGGTTGATATTTCTCTTCCCAAAATGCAGTCAACTGATGCAGATATAGAAATTGAAGGGCCTGGAACTAAAGGGGCAAAGATGGGGATGCCAAAAATTGACATTTCTCTTCCAAAAATGAAGTTACCAGAAGCAGAGTTAGACCTGAAAGGAAAGGAACTGGAAGGACCTGATACAAAGGGCCTGAAAATGAGTATGCCTAAAATTGACATTTCCCTcccaaaaatgaaatcaaaagaggGTGAATATGATGTCCAAGGAATGGACATTAAAGGTCCTTCTGCAAAAGGGCCAAAAATGTCAATGCCGAAAGTGGACATTTCATTGCCAAAGGTGAAATTCCCAGAGGCAGACATGGGTGTGCAAGGACCTGCCATTGAAGGACCTGATGCCAAAGGGCCAAAGATATCAGTGCCAAAAGTGGACATTGCATTACCTAAAGGAAAACTACCTGAGGGAGAGGTGTCTATTCCAGAGGGGAAATTGAAGGTCAATGTCAAAGGGCCAACAGTGGGAATGGATGAAGCAGATGGAAGGCTCAGCATGCCTTCAGTCAAAATGGTGACAGTTAATATTGATATGCCAATGATTGACCTTGATTTGAGTCTCCCAAAGGTTAAAGGGAAAGATACAAGCTTGGAGCGAGGTGTTAGCCCTCCAGATGCCTCCAGAAGCTTTGAAATGCCTGATGTCCAGTTAAAGATGCCCAAAATCCCAGTGCCAAAATTTGGCGTGAAAGGTAAAGATGAGGAGATAGAGACTGACCTTGGTCTCCAAGGTGACATGAAGCTACCAAAAGGAAAGTTTGATGTCAGCCACCCAGAAATGGAAGCTGGCATCAAACCACCTAAAATCAAACTGGATATGAAAGGGCCTGAATTTGATGCCGAGGGAACAGATGCTAAACTGAAACTACCTTCAGTCAAAATGCCAAAACTTGATATCTCCACTCCCAAACTACCAGATGtggatttaaacattaaaatgccaaAGGGAGCAGCTGTTGCAACAACAGGTGGGGATCTAAGTGGCCATGGACCTGAGTTGAGTGCCAAAGGCCCAGATGTCCATATTAAAATGCCTAAACTTCCAACATTTGGCAAAGGAAAAGGGGAGACTGACATCAAAGCTCCTGAACTTGACATAGAAGCCCCAGACTATCATTTTAAAGgccctgaaattaaaatgccCAAATTTGGAATGTCTTTTCCCAAAGGCAAACAGGGAGGATTTGACATAGAAGGTGAAGCAGGCATGAAGAGTGATGTTGATTCTCCCAAGATGAAGGTTAAGGGACCCAAAGAAAAGTTGAAAATTGAGGGGCCTGACATTGATACCACAGATGCAAGCATGAAACTGCCAACTTTAAAACGGCCTACTGTGGATATCTCTGTACCAAAGGTTGATTTGGACTTTGCCTTGCCCAGAGTCAAAGGGTATGACAAGGAGCAGATTGAATTGCTGAAAGCTGAAGCTGAAAGGCCATCATCAGGAGCAAGTTTTGAAGTGCCTGACATTTCCTTGAAAATGCCAAAGTTTTCATTTCCCAAGATGGGAGCCAAGTCAAAGAGCACTGATTTAGTATTAGAGGGACATGTTCCAAAAGGAGAGATTAGACTTACTCCTCCAAGAACACAGGCAGAGGGCAGAGCATCATCTGTAGAGATAGACGCTGAAGGGAAGGTGAAAAGCAAGATAAAAAtgccaaaaatgaaaatgccttcTTTTGGCATAACCAagaaagggggaggggtgggcATTGGCGACCCAGAGGCTGAAGCCAAGGTCAAGAAAGGAAAAGTGGATGTCAAAGGGCATGAAATCAGTGTGGAAGGCCCAGAGGGAAAGGTGAGAACGCCCAAATTAAAATTCCCCAAATTTAAGATTTCAACTCCTAAAGGCAAGGTCCCAGATAGGGAAGCTGACCTCAAAGTAGACAGTGAAGCAAGTGTAAAAGGTGGTATGCAAGCGCCGGATGTCACTATCAAAATGCCAAAGTTCTCCATGCCAAAATTTGGATCTAAGGAAGGTGACCTTGATGTTGGGCCATCGGATGCTAGCATAGAGGGCAAAAGCAAGATCAAAATGCCTTCCCTTGAAATTTCTCTGCCAGCTGTAAAACAACCAGAAGGGGAAGTCTTATTACCAAAGGCTGAAGTAGATGTATCTGAAGAGGATATTAAAGGATATGAAGGACATTTGAAGATCCCTAAAATGCCAACTATTGAGATCTCAGCCCCCAAAATTGAACTGGATGTTGGTTTGCCTAAAGCTAAAGCTGAGGCCTCACATGACTCTACTGCAGGTGCAAAAACTGAAGGCGATGGAAAATATGAGGGACCTGATTTCACACTAAAAATGCCCAAGGTGAGTTTGCCTACATTTGGCATCTCTGGAAGCAAGGAAAAGGACATTGAACTTGATATCAGTGGGGCTAAACCAGACATGAGCACCACCCAGAAAGTTAATATAAAAGTAGCTTCACCAGATCTGGACATTGAGGGGGGTGAAGGCAAACTGAAGATGCCAAAAATACAGTTGCCTAAAGTGGACATATCTGTACCTAAAGGCAAATCTGGAGATGCTGTAGTCTCTCTTCCTGAAGGTGAGGTAGACACTGGGGAAGGGAGGTTTAAGATGCCATCTTTTGGACTTCCAAAGTTTTCTGTCCCCACAGTCAAAGCTCCAGATTTCAACCTTGAAGTCAGTGGAGGAAAAGGCAAACATGAACATGAAATCAGTTACCCTGAATTGAATGTAAAGGGGAAGAAAGTGGAAGGATCCGGCCCAACTGTAGATGTGGATtcatctgattttaaaatgaaaatgcctaAAATCAAAATGCCTTCAATTGGTATAGCAGGTCCAGATTTTGAAGGCACAGACATAGAGCTGGATATAGGCTTACCAAAAGCTGATGCggaaaagggaaaaatcaaAGTTGAGCCTCCAAAGGGAGACATTGATGTGTCTGGCagcagtggaaaaataaaagggcCAAAGGTTAAAGGTACAAAGTTTAATATCGGGATGCCAAAAAACAAGGGGGTAATGGATGCAGGCTTGGAAGCTGAGATAAAGAAGCCAGAAGTAGAAGAAGGTGATGCAGGGGgtagatttaaaattaaaatgcccAAATTTGGTGGCAAGGGCACAATTGAGGTACCTGAACTTGAAGCCGATGTTACAGGGCCAGAAGGCGATGCCAGATTCAAAATGCCAAAAATGTCCCTTCCAGATATAGGATTTTCAGTTTCTAAAGAAGAAGGGCCAGATGCCAGTCTAGATACTTCCCATCCCAAAATAGATCTGGACTCTAAAGGTGGACTCAAGGTCAAGGGTCCTAAAGTGGATCTACCACAGGCTGAGTTTGATGGCCCAGAATCCAGTAGTAAAACAGGCAGATTTAAGCTCCCTGATGTGGAATTGTCAGGTCCTAAAATCAAAGGGCATGGAGACCTTGATATCAGGGGTAGAGAGGCTGACCTCAGCCACCTAGAGGACAAAGAGCGCATTAAGCTGCAAATGCCTAAGATCTCATTACCTTCAGTCGGATTCTCAGACTCCAAGGAGTTAATTGTGCCAGAGGGTGACACAGAGTGCAAAATGAAAGGACCTAAATTTGAAATCAAAGCCCCCCAGCTTGAAATCAAAGTCCCTGAACTGGACATCAAAGCTCCAGAATTCCAAATCAAGTCCCCACAAATAGAGATGGGAGATCCTGAGACAAAGGAGAAGAAAGTCAAAGCCAAGATACCAAAGTTTGGAATTGCCCTACCGAGCATCACCCAGCCTGAAGCAGATGTAAGCATGTCTGCACCAGATGTTACAGTGAAAGGGCctgatgtaaaattaaaaaaggacacCAAAGCTCCTGAGGTGCCTTCCACAGCTGTAGCAGGGGATGGAGATTATGAAGGCCCTAAGATGCCAAAAGTAAAgaaagctgtgtttgtttttgtgaaaccCAAAACCAATGGGTCAGATGCCTCAGCCAGCCACTCTGAAGGAGAGGCAAGCTTGGGCTCCACTGAAGCCAAATATAAAGTGCCAAAGATCAAGATGAAGCCAAGTTTTGGGAAATCAAACTCCAAGTCCAAAGGAGCAGAGTTTAAtggagaggcagagaaagacTCAAGAGAAGAGGACGGGAAGTCAAAGGCAGGCAAACTGAAAATGCCCAAAGTCACCTTCTCTCCGGGAAAAACTGGGTCATTTGACGTGACTTTGAATGGTTCGGGGTCTGCCGGGTCAAAGAAGGAAGAGGTGTCAGGGACTCGAGTCAACAGCAGAAGCAGTCCGGCATTCCAGAATGGATCCCAGGAAGACAAATCCCTTTTTGGAAAGCTGAAGCTGCCCCAGATTGAATTCTCCTCTCCGTATCCCAAAGtgggtggaggggagggggatgCTGAGATGAGTATGAAGTTGGTAAAGACTGAAGATGCTTCTGGGTCTGATGCGGAAAGCAAAGGGATGAAATTCAAGTCACCCAAAATTTCCTTCCCAGGCTTCAAAAAGAAGATGGGTGAGGAAGAGAAGTCAGGGGCATTGGTGTCATCCAAAGCCAGGACAGAAATGGTATTAATGGAACCAGAGGAAAGAGAAGGTTCTGAATCTCCCAAAGTCTCTATTGGATTTGTCTCTGGGAGAGTCCGGGGAGATCCAAAGAGTACTGGCGCAGCAGGTAGTTATGTGACCGCGAAAACTGGGTCGAGAGACAAGGAGTCAGGTGACAAACGAGAGACGGAGGTCAAGGACAAGTCACCCCGATTCAAGATTCCCAAGTTCAGCCTGAGCCCACGATCCACAGGGATTCTTCATATTACAACAGAAGGCTCTCCGAAGAGCAGCAGAGATTCCTTGCAGCGATCCGAAGATGAGGAACGCTCTTCTGGTTTCAAGATGCAAATGCCAAGGATAGGATTCTCGGCCCAGCACACTTCCGAAGAGCAGACAGTTACAGCTGAGGAGGGCAGCGTTGCCATtgtaacaaaaacatcaaagcaCACACTAACAGAATCAGGGACTGACAAATCCACTACCATTTGAGTGAATGGATAACCATTTATCAACCTGAGGACaatattagagagagagagagagagagagtgagagagagagagtgagagagagtgagagtgagagagagaagtgaagCCACCaccatttatctttttttaagaattgaccactttattttattgttgttattgttgtttttctattttatttctgattctTTTTAATTCTCATTGTTTTACTAGCTCAACTCTGAATGTTGACttcactaaaataaaaaaaaaaactaaatcatgaAAAAGAAGAATATGTAACCATTTCTCCGATGTAAAGTGACTGCCACAAACCTGCCCCATTCTGAATAGAATGCTGATCATGGTAAAATTATTAGATTGGACGCAAGAATGTGTTTTAACAAACTGACactgtggttttaaatgtatggtgTTTACGattattaaatgcaatcaaATTAGCTTGTTAAGGGGAACGAGTTGCTTTGGCACTAACAGATACTGAAACACGTGGTTTTAACTTTCACTTGCTAGTACAATTGatgattgattttaaaaagaaaaagaaaaaaaatgtgtgcctCTATGTTCAATGGTCTGCAAAATGTGAGGTTTTTCAAGCAGTCTGAAGAAGTTACTTTcctgtttgcttttaaaatatatatatgatccaTTGAGaatggcatttttgttttcttaattccAGGTGAAAGTGTTATGAGGTGAActgcaattacatttacagcCTGCTTTGTATTAAGCTACCAGGATCTGATTTTGTCATAAAGACAGATTGATACTATAATGTATGTTTCTAGATGGGACTAGGCCTATCTTggacattttccttttcttctgaaTGTACTTAGGATAATATGAAGATACATGACTTTCCTGTCCTTAAACGTTTACTGTGgtcattaaacaaacaaaagcaaagattACAAAGCCCGGAAAAATTGAGAATGCAATATTGGCCTGCTGAAGCCTTTAGTTAAACATGTCACAAGAtaggaaaaacattaaattaaacattaaacatttatggCAAATTGGATGTTTTGTCGACTTTGTGGTGACAAAGTAAACTATACAAATTCATACATAACTTCATACAGtactttaatttattgaaacattcaagcagtataaaatatattatcaatGGCAGTAGGAGAAGCTTTGCCTTTTGCATTATTCCAAGGCATCAAGTACTATGTAGATTTCAGTTTGCAAGGAGTGCACCACGACTGCTTTTATGTATTGTGATGTTTTGGTACACCCATTTATGGTGAGAGCTTGTACATCTACCACTCCAATAATGCCCTTTGTCAAAAAGCTGGGATTTTAAGACAGACATCACAGAGAAAAGTGTAAAGAACATAGCTGTCCTCCATCCAACAGAACACCACTGGGATTAACTGCAGCAGTGAAGCAGCCATAGAACCCAGCCTCCCTGACTTCACAGGAAAGCGTGCCATGACAGGAACGTCACAGTATCCAT

Function

GO: NA

KEGG:

id description
K23934 AHNAK; neuroblast differentiation-associated protein AHNAK

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013567 True 9398 mRNA 0.43 6 36462852 36476392

Neighbor

gene id symbol gene type direction distance location
AMCG00013568 NA coding upstream 18122 36434886 ~ 36444730 (+)
AMCG00013564 LOC106612713,LOC106580732,LOC105023074,LOC108435511 coding upstream 59834 36380969 ~ 36403018 (+)
AMCG00013559 shkbp1,LOC106612709 coding upstream 330593 36119566 ~ 36132259 (+)
AMCG00013558 sptbn4,LOC106612708 coding upstream 351789 36097155 ~ 36111063 (+)
AMCG00013556 NA coding upstream 554107 35899091 ~ 35908745 (+)
AMCG00013573 LOC107548551 coding downstream 215760 36692152 ~ 36693141 (+)
AMCG00013570 NA coding downstream 232983 36709375 ~ 36712969 (+)
AMCG00013574 irf2bp1,irf2bpl,LOC106580746,LOC108443036,LOC106612697 coding downstream 317649 36794041 ~ 36797976 (+)
AMCG00013576 NA coding downstream 330366 36806758 ~ 36810451 (+)
AMCG00013575 NA coding downstream 367136 36843528 ~ 36860797 (+)
G45343 NA non-coding upstream 54117 36406043 ~ 36408735 (+)
G45301 NA non-coding upstream 274910 36160134 ~ 36187942 (+)
G45276 NA non-coding upstream 345521 36114055 ~ 36117331 (+)
G45230 NA non-coding upstream 478419 35974238 ~ 35984433 (+)
G45229 NA non-coding upstream 488975 35973478 ~ 35973877 (+)
G45373 NA non-coding downstream 137343 36613735 ~ 36613942 (+)
G45395 NA non-coding downstream 222406 36698798 ~ 36700063 (+)
G45397 NA non-coding downstream 228260 36704652 ~ 36704893 (+)
G45403 NA non-coding downstream 243260 36719652 ~ 36719989 (+)
G45405 NA non-coding downstream 251558 36727950 ~ 36729956 (+)
G45338 NA other upstream 58951 36403354 ~ 36403901 (+)
AMCG00013566 NA other upstream 92765 36338262 ~ 36370087 (+)
AMCG00013560 sptbn4,LOC107602096,LOC103155361 other upstream 377009 36060755 ~ 36085843 (+)
G45209 LOC107575789 other upstream 803019 35655302 ~ 35659833 (+)
G45174 NA other upstream 1124800 35334890 ~ 35338052 (+)
AMCG00013571 eml2,LOC107757343,LOC107685092,LOC106530730 other downstream 144010 36620402 ~ 36646066 (+)
G45406 nova2,LOC103039352,LOC103141028,LOC107669728,LOC107089881,LOC107548550 other downstream 260285 36736677 ~ 36738479 (+)
G45439 NA other downstream 398515 36874907 ~ 36877603 (+)
AMCG00013587 zgc:101731,LOC107683430,LOC107757427,LOC105909676,LOC108425805,LOC108277511,LOC103044784,LOC106580895,LOC100194580 other downstream 635376 37111768 ~ 37122611 (+)
AMCG00013595 NA other downstream 838821 37315213 ~ 37327711 (+)

Expression


Co-expression Network